HHsearch results for GI: 254780245 and protein with PDBid: 3jyw_E
>3jyw_E 60S ribosomal protein L5; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_E
Probab=99.20 E-value=2.9e-12 Score=92.31 Aligned_cols=94 Identities=27% Similarity=0.251 Sum_probs=80.7
Q ss_pred CCEEEEEEECCCEEEEEEE--CCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC---------------
Q ss_conf 8249999638709999996--27975999985021000001346866789999999999999977---------------
Q gi|254780245|r 26 RLRLSVCRSSKHIYGQIID--DSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKV--------------- 88 (120)
Q Consensus 26 ~pRL~V~rSnkhiyAQiId--d~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~--------------- 88 (120)
+|||+|.+||++|.+|||. ..++.|||+|.|.|..-.++....+|.+||+..|.++|.+++++
T Consensus 38 k~R~VVR~TN~~ii~Qiv~~~~~GD~vl~sA~S~eL~kyG~k~g~~N~~AaYlTGlL~arr~l~k~gl~~~~~g~~e~~g 117 (237)
T 3jyw_E 38 KYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEG 117 (237)
T ss_dssp SSSEECCCCSSCCEEECCCBCSSSBCCSSEEEGGGSTTTSCCSCSCBSHHHHHHHHHHHHCBSCSSSCSSBCSSCSSSSS
T ss_pred CCEEEEEEECCCEEEEEEEEECCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
T ss_conf 63699998679479999985078999999841656866375689873169999889999999886172454267521477
Q ss_pred ------------CCCEEEECCCCCCCH--HHHHHHHHHHHHCCCC
Q ss_conf ------------997999838986312--2599999999965878
Q gi|254780245|r 89 ------------GVKSVYFDRGKHLYC--GRIAALADAVRKGGVS 119 (120)
Q Consensus 89 ------------gI~~v~FDR~g~~yH--Grvka~ad~~R~~Gl~ 119 (120)
++.++++|-|-.+.. +||.|..-++-++||+
T Consensus 118 ~~~~~e~~~~~~~~f~aiLDiGL~r~t~G~RVfaalKGavD~Gl~ 162 (237)
T 3jyw_E 118 EYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLY 162 (237)
T ss_dssp CCCCCSCCCSSCCCCSCCEECCSSCCCTTCHHHHHHHHHHTTSSC
T ss_pred CEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf 510222224688871577414654576562046743301146733