HHsearch results for GI: 254780245 and protein with PDBid: 3jyw_E

>3jyw_E 60S ribosomal protein L5; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_E
Probab=99.20  E-value=2.9e-12  Score=92.31  Aligned_cols=94  Identities=27%  Similarity=0.251  Sum_probs=80.7

Q ss_pred             CCEEEEEEECCCEEEEEEE--CCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHC---------------
Q ss_conf             8249999638709999996--27975999985021000001346866789999999999999977---------------
Q gi|254780245|r   26 RLRLSVCRSSKHIYGQIID--DSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKV---------------   88 (120)
Q Consensus        26 ~pRL~V~rSnkhiyAQiId--d~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~---------------   88 (120)
                      +|||+|.+||++|.+|||.  ..++.|||+|.|.|..-.++....+|.+||+..|.++|.+++++               
T Consensus        38 k~R~VVR~TN~~ii~Qiv~~~~~GD~vl~sA~S~eL~kyG~k~g~~N~~AaYlTGlL~arr~l~k~gl~~~~~g~~e~~g  117 (237)
T 3jyw_E           38 KYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEG  117 (237)
T ss_dssp             SSSEECCCCSSCCEEECCCBCSSSBCCSSEEEGGGSTTTSCCSCSCBSHHHHHHHHHHHHCBSCSSSCSSBCSSCSSSSS
T ss_pred             CCEEEEEEECCCEEEEEEEEECCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
T ss_conf             63699998679479999985078999999841656866375689873169999889999999886172454267521477


Q ss_pred             ------------CCCEEEECCCCCCCH--HHHHHHHHHHHHCCCC
Q ss_conf             ------------997999838986312--2599999999965878
Q gi|254780245|r   89 ------------GVKSVYFDRGKHLYC--GRIAALADAVRKGGVS  119 (120)
Q Consensus        89 ------------gI~~v~FDR~g~~yH--Grvka~ad~~R~~Gl~  119 (120)
                                  ++.++++|-|-.+..  +||.|..-++-++||+
T Consensus       118 ~~~~~e~~~~~~~~f~aiLDiGL~r~t~G~RVfaalKGavD~Gl~  162 (237)
T 3jyw_E          118 EYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLY  162 (237)
T ss_dssp             CCCCCSCCCSSCCCCSCCEECCSSCCCTTCHHHHHHHHHHTTSSC
T ss_pred             CEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf             510222224688871577414654576562046743301146733