HHsearch results for GI: 254780245 and protein with PDBid: 3ofq_O
>3ofq_O 50S ribosomal protein L18; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_O 2wwq_O 3ofr_O* 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O 2i2v_O 2j28_O 2i2t_O* 2qao_O* 2qba_O* 2qbc_O* 2qbe_O 2qbg_O 2qbi_O* ...
Probab=100.00 E-value=1.7e-44 Score=283.30 Aligned_cols=116 Identities=42% Similarity=0.635 Sum_probs=112.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 87999998998776875057878824999963870999999627975999985021000001346866789999999999
Q gi|254780245|r 3 TKKKVLARRISRIRRHLKSVSRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLV 82 (120)
Q Consensus 3 ~k~~~~~kR~~R~R~k~k~~~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia 82 (120)
+|+..+.+|+.|+|+++++.. +|||+|||||+|||||||||.+++||||+||++++++..++..+|+++|+.||++||
T Consensus 1 nK~~~R~rR~~R~R~ki~~~~--~pRL~V~rSnkhiyaQiIdd~~~~tl~saST~~k~~~~~~~~~~n~~aA~~vG~~la 78 (116)
T 3ofq_O 1 DKKSARIRRATRARRKLQELG--ATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVA 78 (116)
T ss_dssp CTHHHHHHHHHHHHTTTTTTC--SCEECCCEETTEECCBEECTTSSCCCCBCCSSSHHHHTTCSCSSSTTHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCC--CCEEEEEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 927889999999999863689--975999970881899999779996899987324444321267877789999999999
Q ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99997799799983898631225999999999658789
Q gi|254780245|r 83 ERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 83 ~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
++|+++||++|+|||+||+|||||+||||++||+||+|
T Consensus 79 ~ra~~~gI~~v~fDr~g~~yhGrvkalad~~Re~Gl~F 116 (116)
T 3ofq_O 79 ERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF 116 (116)
T ss_dssp HHHHHHTCCCCCCCCTTSCTTSTTTTTSSTTTSSSCCC
T ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 99998699999976898773269999999999828889