HHSEARCH alignment of GI: 254780245 and SCOP domain: d1ovya_

Alignment

Probab=100.00  E-value=3.8e-39  Score=250.18  Aligned_cols=96  Identities=52%  Similarity=0.773  Sum_probs=91.1

Q ss_pred             CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf             87882499996387099999962797599998502100000134686678999999999999997799799983898631
Q gi|254780245|r   23 SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKHLY  102 (120)
Q Consensus        23 ~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~y  102 (120)
                      +.++|||+|||||+|||||||||.+++||+++||++++++..  ..+|+++|++||++||++++++||++|+||||||+|
T Consensus         2 t~~rpRL~V~kSnkhiyaQlIdd~~~~tl~s~St~~k~~~~~--~~~n~~aA~~vG~~~a~kak~~gi~~vvfDr~g~~y   79 (97)
T d1ovya_           2 TTERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLD--STNNIEAAKKVGELVAKRALEKGIKQVVFDRGGYLY   79 (97)
T ss_dssp             CSSCCSEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTCSS--CTTSHHHHHHHHHHHHHHHHHHSSSCCCCCSTTCSS
T ss_pred             CCCCCEEEEEEECCEEEEEEEECCCCEEEEEECCHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             988878999983783899999757980899731133443123--457399999999999999998699789973799714


Q ss_pred             HHHHHHHHHHHHHCCCCC
Q ss_conf             225999999999658789
Q gi|254780245|r  103 CGRIAALADAVRKGGVSF  120 (120)
Q Consensus       103 HGrvka~ad~~R~~Gl~F  120 (120)
                      ||||+||||++||+||+|
T Consensus        80 hGrvka~a~~~R~~Gl~F   97 (97)
T d1ovya_          80 HGRVKALADAAREAGLEF   97 (97)
T ss_dssp             CSSTHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHCCCC
T ss_conf             189999999999828889

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Translational machinery components
family: Ribosomal protein L18 and S11
domain: Ribosomal protein L18 (L18p)
species: Bacillus stearothermophilus [TaxId: 1422]