Query gi|254780245|ref|YP_003064658.1| 50S ribosomal protein L18 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 120
No_of_seqs 103 out of 1938
Neff 5.6
Searched_HMMs 13730
Date Tue May 24 05:09:28 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780245.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gycm1 c.55.4.1 (M:3-115) Rib 100.0 7E-44 0 278.2 6.7 113 4-118 1-113 (113)
2 d1ovya_ c.55.4.1 (A:) Ribosoma 100.0 3.8E-39 2.8E-43 250.2 7.9 96 23-120 2-97 (97)
3 d2zjrl1 c.55.4.1 (L:8-111) Rib 100.0 8E-40 5.9E-44 254.2 3.8 102 10-117 1-104 (104)
4 d2j01s1 c.55.4.1 (S:23-108) Ri 100.0 6.2E-37 4.5E-41 237.1 0.5 86 26-116 1-86 (86)
5 d1vqon1 c.55.4.1 (N:1-186) Rib 100.0 5.6E-34 4.1E-38 219.6 12.2 110 8-119 11-128 (186)
6 d2uubk1 c.55.4.1 (K:11-129) Ri 96.9 0.0096 7E-07 34.4 10.9 86 28-119 8-94 (119)
7 d2qalk1 c.55.4.1 (K:12-128) Ri 96.0 0.019 1.4E-06 32.7 8.1 85 28-119 8-94 (117)
8 d1hl9a2 c.1.8.11 (A:7-356) Put 70.1 3.5 0.00025 19.3 5.0 42 79-120 102-162 (350)
9 d1rcua_ c.129.1.1 (A:) Hypothe 48.0 8.6 0.00062 17.0 5.4 40 70-118 21-60 (170)
10 d1pdaa2 d.50.2.1 (A:220-307) P 47.2 8.8 0.00064 16.9 4.5 22 69-90 59-80 (88)
11 d2ji7a2 c.36.1.5 (A:7-194) Oxa 42.9 10 0.00075 16.5 4.5 38 78-120 7-44 (188)
12 d1ozha2 c.36.1.5 (A:7-187) Cat 42.6 9.8 0.00072 16.6 3.1 38 78-120 8-45 (181)
13 d1u3da2 c.28.1.1 (A:13-197) Cr 29.7 17 0.0012 15.2 4.1 42 79-120 79-121 (185)
14 d1byka_ c.93.1.1 (A:) Trehalos 28.8 18 0.0013 15.1 6.1 46 75-120 100-149 (255)
15 d2pgda2 c.2.1.6 (A:1-176) 6-ph 27.8 18 0.0013 15.0 4.8 24 77-100 13-36 (176)
16 d1aila_ a.16.1.1 (A:) N-termin 27.7 18 0.0013 15.0 2.8 20 68-87 51-70 (70)
17 d1zy9a2 c.1.8.13 (A:178-525) A 26.6 19 0.0014 14.9 3.6 28 69-97 124-151 (348)
18 d1pvda2 c.36.1.5 (A:2-181) Pyr 24.8 21 0.0015 14.7 3.4 39 77-120 5-44 (180)
19 d2rhca1 c.2.1.2 (A:5-261) beta 24.3 21 0.0016 14.6 4.4 42 74-119 11-52 (257)
20 d1jaya_ c.2.1.6 (A:) Coenzyme 24.1 21 0.0016 14.6 3.3 37 76-116 11-47 (212)
21 d1ulza2 c.30.1.1 (A:1-114) Bio 23.7 22 0.0016 14.6 4.3 47 71-120 55-101 (114)
22 d1e5qa1 c.2.1.3 (A:2-124,A:392 23.4 22 0.0016 14.5 2.4 22 77-98 13-34 (182)
23 d1xg5a_ c.2.1.2 (A:) Putative 23.3 22 0.0016 14.5 5.6 42 73-118 18-59 (257)
24 d1weha_ c.129.1.1 (A:) Hypothe 21.5 24 0.0018 14.3 5.5 38 71-117 19-56 (171)
25 d1ovma2 c.36.1.5 (A:3-180) Ind 20.8 25 0.0018 14.2 4.7 39 77-120 5-44 (178)
26 d2djia2 c.36.1.5 (A:3-186) Pyr 20.7 25 0.0018 14.2 2.2 39 77-120 6-46 (184)
27 d1weka_ c.129.1.1 (A:) Hypothe 20.7 25 0.0018 14.2 5.6 39 71-118 51-89 (208)
28 d1p5dx1 c.84.1.1 (X:9-154) Pho 20.5 25 0.0018 14.2 6.5 57 60-119 10-70 (146)
29 d1yx1a1 c.1.15.7 (A:3-252) Hyp 20.2 26 0.0019 14.1 3.1 40 81-120 85-124 (250)
No 1
>d2gycm1 c.55.4.1 (M:3-115) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7e-44 Score=278.24 Aligned_cols=113 Identities=42% Similarity=0.631 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 79999989987768750578788249999638709999996279759999850210000013468667899999999999
Q gi|254780245|r 4 KKKVLARRISRIRRHLKSVSRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVE 83 (120)
Q Consensus 4 k~~~~~kR~~R~R~k~k~~~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~ 83 (120)
|+..+.+|+.|+|+++++.. .|||+|||||+|||||||||.+++|||++||++++++..++..+|+++|+.||++||+
T Consensus 1 k~~~r~rR~~R~R~ki~~~~--~pRL~V~rSnkhiyaQiIdd~~~~tl~saST~~k~~~~~~~~~~n~~aA~~vG~~la~ 78 (113)
T d2gycm1 1 KKSARIRRATRARRKLQELG--ATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAE 78 (113)
T ss_dssp CCCCHHHHTTCSCSTTTTTT--CCCCBEEECSSCEEEEEEETTTTEEEEEEETTGGGGTSCCSCSSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCC--CCEEEEEEECCCEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 90888999999999862689--9759999817817999998469917887410356665432777532899999999999
Q ss_pred HHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99977997999838986312259999999996587
Q gi|254780245|r 84 RAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGV 118 (120)
Q Consensus 84 r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl 118 (120)
+++++||++|+|||+||+|||||+||||++||+||
T Consensus 79 ra~~~gI~~vvfDR~g~~YhGrVka~ad~aRe~Gl 113 (113)
T d2gycm1 79 RALEKGIKDVSFDRSGFQYHGRVQALADAAREAGL 113 (113)
T ss_dssp HHHHHTCCCCCCBCCSCCSSSHHHHHHHHHHHHTC
T ss_pred HHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99987999999879998641499999999997489
No 2
>d1ovya_ c.55.4.1 (A:) Ribosomal protein L18 (L18p) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=3.8e-39 Score=250.18 Aligned_cols=96 Identities=52% Similarity=0.773 Sum_probs=91.1
Q ss_pred CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 87882499996387099999962797599998502100000134686678999999999999997799799983898631
Q gi|254780245|r 23 SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKHLY 102 (120)
Q Consensus 23 ~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~y 102 (120)
+.++|||+|||||+|||||||||.+++||+++||++++++.. ..+|+++|++||++||++++++||++|+||||||+|
T Consensus 2 t~~rpRL~V~kSnkhiyaQlIdd~~~~tl~s~St~~k~~~~~--~~~n~~aA~~vG~~~a~kak~~gi~~vvfDr~g~~y 79 (97)
T d1ovya_ 2 TTERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLD--STNNIEAAKKVGELVAKRALEKGIKQVVFDRGGYLY 79 (97)
T ss_dssp CSSCCSEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTCSS--CTTSHHHHHHHHHHHHHHHHHHSSSCCCCCSTTCSS
T ss_pred CCCCCEEEEEEECCEEEEEEEECCCCEEEEEECCHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 988878999983783899999757980899731133443123--457399999999999999998699789973799714
Q ss_pred HHHHHHHHHHHHHCCCCC
Q ss_conf 225999999999658789
Q gi|254780245|r 103 CGRIAALADAVRKGGVSF 120 (120)
Q Consensus 103 HGrvka~ad~~R~~Gl~F 120 (120)
||||+||||++||+||+|
T Consensus 80 hGrvka~a~~~R~~Gl~F 97 (97)
T d1ovya_ 80 HGRVKALADAAREAGLEF 97 (97)
T ss_dssp CSSTHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCCC
T ss_conf 189999999999828889
No 3
>d2zjrl1 c.55.4.1 (L:8-111) Ribosomal protein L18 (L18p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00 E-value=8e-40 Score=254.21 Aligned_cols=102 Identities=55% Similarity=0.782 Sum_probs=91.6
Q ss_pred HHHHHHHHHHCCC--CCCCCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8998776875057--87882499996387099999962797599998502100000134686678999999999999997
Q gi|254780245|r 10 RRISRIRRHLKSV--SRGRLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVK 87 (120)
Q Consensus 10 kR~~R~R~k~k~~--~~~~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~ 87 (120)
||+.|++++++.. ..++|||+|||||+|||||||||++++||||+||.+++ .++|+++|..||++||+++++
T Consensus 1 kR~~R~r~k~r~~~~~~~rpRL~V~rSnkhiyaQiIDd~~~~tl~s~St~~~~------~~~~~~~a~~vG~~ia~~a~~ 74 (104)
T d2zjrl1 1 RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALK------SGNKTDTAAAVGKALAAAAAE 74 (104)
T ss_dssp CHHHHHHHHHHSCSTTTCSEEECCCTTSSCCCCCEEETTTTEECCCCCSCSCC------TTCSSSSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCC------CCCHHHHHHHHHHHHHHHHHH
T ss_conf 91488887774344668986799997067068999965788678762244322------453156899999999999998
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 799799983898631225999999999658
Q gi|254780245|r 88 VGVKSVYFDRGKHLYCGRIAALADAVRKGG 117 (120)
Q Consensus 88 ~gI~~v~FDR~g~~yHGrvka~ad~~R~~G 117 (120)
+||++|+||||||+|||||+||||++||+|
T Consensus 75 kgi~~v~FDR~g~~YHGrvka~ad~~R~~G 104 (104)
T d2zjrl1 75 KGIKQVVFDRGSYKYHGRVKALADAAREGG 104 (104)
T ss_dssp TCCCCCEECCCSSCSCSHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 799899987899732139999999998677
No 4
>d2j01s1 c.55.4.1 (S:23-108) Ribosomal protein L18 (L18p) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=6.2e-37 Score=237.09 Aligned_cols=86 Identities=57% Similarity=0.800 Sum_probs=82.0
Q ss_pred CCEEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
Q ss_conf 82499996387099999962797599998502100000134686678999999999999997799799983898631225
Q gi|254780245|r 26 RLRLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSVYFDRGKHLYCGR 105 (120)
Q Consensus 26 ~pRL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGr 105 (120)
+|||+|||||+|||||||||.+++||+|+||++++++ .+|+++|+.||++||++++++||++|+||||||+||||
T Consensus 1 R~RL~V~rSnk~iyaQiIDd~~~~tl~s~St~~k~~k-----~~~~~~A~~vG~~la~~ak~~gI~~v~FDR~g~~YHGr 75 (86)
T d2j01s1 1 RLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLK-----GNKTEVARQVGRALAEKALALGIKQVAFDRGPYKYHGR 75 (86)
T ss_dssp SCEEECCBCSSCBCEEEEETTTTEEEEEECSTTTCCC-----SCHHHHHHHHHHHHHHHHHHTSCCCCBCCCSTTCSSSS
T ss_pred CCEEEEEECCCEEEEEEEECCCCEEEEEEECCCHHHC-----CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
T ss_conf 9579999817838999997679869999821311104-----87789999999999999998799889994899722029
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999999965
Q gi|254780245|r 106 IAALADAVRKG 116 (120)
Q Consensus 106 vka~ad~~R~~ 116 (120)
||||||++||+
T Consensus 76 vka~Ad~~Reg 86 (86)
T d2j01s1 76 VKALAEGAREG 86 (86)
T ss_dssp CCCCSSCTTCC
T ss_pred HHHHHHHHHCC
T ss_conf 99999987279
No 5
>d1vqon1 c.55.4.1 (N:1-186) Ribosomal protein L18 (L18p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00 E-value=5.6e-34 Score=219.56 Aligned_cols=110 Identities=26% Similarity=0.285 Sum_probs=97.2
Q ss_pred HHHHHHHH----HHHHCCCCCCCCEEEEEEECCCEEEEEE--ECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99899877----6875057878824999963870999999--62797599998502100000134686678999999999
Q gi|254780245|r 8 LARRISRI----RRHLKSVSRGRLRLSVCRSSKHIYGQII--DDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLL 81 (120)
Q Consensus 8 ~~kR~~R~----R~k~k~~~~~~pRL~V~rSnkhiyAQiI--dd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~i 81 (120)
+.||..++ |.++.. ..+|||+||+||+||||||| ||.+++||||+||.+....++....+|++||+.+|.++
T Consensus 11 RRRRe~kT~y~~R~rl~~--s~kpRLvVrrSNk~IyaQII~~d~~gd~vlaSAsS~el~k~g~k~~~~N~~AAy~~G~li 88 (186)
T d1vqon1 11 RRRREARTDYHQRLRLLK--SGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLA 88 (186)
T ss_dssp HHHHTTCCCHHHHHHHHT--TCSCEEEEEECSSCEEEEEEECCTTSCEEEEEEESGGGGGGSCCSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 999864110888888733--899769999958915999988448999799997043255420004763777998867999
Q ss_pred HHHHHHCCCCEEEECCC--CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99999779979998389--863122599999999965878
Q gi|254780245|r 82 VERAVKVGVKSVYFDRG--KHLYCGRIAALADAVRKGGVS 119 (120)
Q Consensus 82 a~r~~~~gI~~v~FDR~--g~~yHGrvka~ad~~R~~Gl~ 119 (120)
|++++++||++|+||+| ||.|||||+|+||++||+||+
T Consensus 89 A~ra~~~gi~~vvfD~G~~~~~yhgRV~A~akgard~GL~ 128 (186)
T d1vqon1 89 GLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLD 128 (186)
T ss_dssp HHHHHHTTCCBCEEECTTSCCCTTCHHHHHHHHHHHTTCB
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 9999862556138850777787652299999999966916
No 6
>d2uubk1 c.55.4.1 (K:11-129) Ribosomal protein S11 {Thermus thermophilus [TaxId: 274]}
Probab=96.89 E-value=0.0096 Score=34.44 Aligned_cols=86 Identities=23% Similarity=0.204 Sum_probs=64.2
Q ss_pred EEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCCCCCCHHHH
Q ss_conf 499996387099999962797599998502100000134686678999999999999997799799-9838986312259
Q gi|254780245|r 28 RLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRGKHLYCGRI 106 (120)
Q Consensus 28 RL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~g~~yHGrv 106 (120)
.+.|+-|..|..+.+.| .+|.+++.+|+-...|++..+ +.-.||..+++.+++++++.|++.| ++=+|- --||-
T Consensus 8 ivhI~~t~NNT~itlTD-~~Gn~i~~~S~G~~gfkg~rk--~t~~Aa~~~a~~~~~k~~~~g~~~v~v~~kG~--G~gR~ 82 (119)
T d2uubk1 8 RAYIHASYNNTIVTITD-PDGNPITWSSGGVIGYKGSRK--GTPYAAQLAALDAAKKAMAYGMQSVDVIVRGT--GAGRE 82 (119)
T ss_dssp EEEEEECSSCEEEEEEC-TTSCEEEEEETTTSSCCSGGG--GSHHHHHHHHHHHHHHHHTTTCCEEEEEEECC--CTTHH
T ss_pred EEEEEECCCCEEEEEEC-CCCCEEEEEECCCCEECCCCC--CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC--CCCHH
T ss_conf 89999236889999987-999999998446200066433--45257899999999999984981999999868--99939
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 9999999965878
Q gi|254780245|r 107 AALADAVRKGGVS 119 (120)
Q Consensus 107 ka~ad~~R~~Gl~ 119 (120)
++.-++...||+
T Consensus 83 -~~ik~l~~~g~k 94 (119)
T d2uubk1 83 -QAIRALQASGLQ 94 (119)
T ss_dssp -HHHHHHHTSSSE
T ss_pred -HHHHHHHHCCCE
T ss_conf -999999878988
No 7
>d2qalk1 c.55.4.1 (K:12-128) Ribosomal protein S11 {Escherichia coli [TaxId: 562]}
Probab=96.04 E-value=0.019 Score=32.67 Aligned_cols=85 Identities=21% Similarity=0.229 Sum_probs=64.4
Q ss_pred EEEEEEECCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-EECCC-CCCCHHH
Q ss_conf 499996387099999962797599998502100000134686678999999999999997799799-98389-8631225
Q gi|254780245|r 28 RLSVCRSSKHIYGQIIDDSIGHTLVSASSLNEPLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV-YFDRG-KHLYCGR 105 (120)
Q Consensus 28 RL~V~rSnkhiyAQiIdd~~~~tl~saST~~k~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v-~FDR~-g~~yHGr 105 (120)
-+.|+.|..|....+. |.+|.+++..|+-...+++..+. .-.||..+++.+++++++.|++.| ++=+| |. ||
T Consensus 8 i~hI~~t~NNTiitlT-D~~G~~~~~~S~G~~gfkg~~K~--t~~Aa~~~a~~~~~~~~~~gi~~v~V~~kG~G~---GR 81 (117)
T d2qalk1 8 VAHIHASFNNTIVTIT-DRQGNALGWATAGGSGFRGSRKS--TPFAAQVAAERCADAVKEYGIKNLEVMVKGPGP---GR 81 (117)
T ss_dssp EEEEECCSSCCEEEEE-ETTSCEEEEEETTTSSCCHHHHT--SHHHHHHHHHHHHHHHGGGTCCEEEEEEECCST---TT
T ss_pred EEEEEECCCCEEEEEE-CCCCCEEEEEECCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---CH
T ss_conf 9999925798999998-79999999986323554664333--347999999999999998399689999967999---64
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 99999999965878
Q gi|254780245|r 106 IAALADAVRKGGVS 119 (120)
Q Consensus 106 vka~ad~~R~~Gl~ 119 (120)
- +..-++...||+
T Consensus 82 ~-~air~l~~~gl~ 94 (117)
T d2qalk1 82 E-STIRALNAAGFR 94 (117)
T ss_dssp T-HHHHHHHHTTCE
T ss_pred H-HHHHHHHHCCCE
T ss_conf 9-999999758988
No 8
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.15 E-value=3.5 Score=19.29 Aligned_cols=42 Identities=26% Similarity=0.305 Sum_probs=31.7
Q ss_pred HHHHHHHHHCCCCEEEEC---CCCC--------CCH--------HHHHHHHHHHHHCCCCC
Q ss_conf 999999997799799983---8986--------312--------25999999999658789
Q gi|254780245|r 79 NLLVERAVKVGVKSVYFD---RGKH--------LYC--------GRIAALADAVRKGGVSF 120 (120)
Q Consensus 79 ~~ia~r~~~~gI~~v~FD---R~g~--------~yH--------Grvka~ad~~R~~Gl~F 120 (120)
+..++.++++|.+-|+|- ..|| .|+ --|++|++++|+.||+|
T Consensus 102 ~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~ 162 (350)
T d1hl9a2 102 QEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF 162 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf 9999999986997799888834776357999999887577778745999999997449841
No 9
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}
Probab=47.98 E-value=8.6 Score=16.95 Aligned_cols=40 Identities=23% Similarity=0.325 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 6789999999999999977997999838986312259999999996587
Q gi|254780245|r 70 NIVAATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGV 118 (120)
Q Consensus 70 ni~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl 118 (120)
-.+.|..+|+.||+ .|. . +|- ||+ .|--.|++++++++|=
T Consensus 21 ~~~~a~~lG~~la~----~g~-~-V~~-GG~--~GlM~ava~ga~~~gg 60 (170)
T d1rcua_ 21 LRDICLELGRTLAK----KGY-L-VFN-GGR--DGVMELVSQGVREAGG 60 (170)
T ss_dssp GHHHHHHHHHHHHH----TTC-E-EEE-CCS--SHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH----CCC-E-EEC-CCC--CCHHHHHHHHHHHCCC
T ss_conf 99999999999998----799-8-987-885--4787999998986388
No 10
>d1pdaa2 d.50.2.1 (A:220-307) Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.22 E-value=8.8 Score=16.88 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 6678999999999999997799
Q gi|254780245|r 69 ANIVAATAVGNLLVERAVKVGV 90 (120)
Q Consensus 69 ~ni~aA~~vG~~ia~r~~~~gI 90 (120)
++++.+..+|+.+|+.++++|-
T Consensus 59 g~~~~~~~lg~~la~~L~~~Ga 80 (88)
T d1pdaa2 59 GAPQDAEQMGISLAEELLNNGA 80 (88)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTH
T ss_pred ECHHHHHHHHHHHHHHHHHHCH
T ss_conf 7788999999999999999089
No 11
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=42.88 E-value=10 Score=16.48 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=27.8
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999997799799983898631225999999999658789
Q gi|254780245|r 78 GNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 78 G~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
+.+|++.+...||+.|.-=-|+ -+-.|.|++.+.|++|
T Consensus 7 ~~~i~~~L~~~GV~~vFg~pG~-----~~~~~~~al~~~~i~~ 44 (188)
T d2ji7a2 7 FHVLIDALKMNDIDTMYGVVGI-----PITNLARMWQDDGQRF 44 (188)
T ss_dssp HHHHHHHHHHTTCCEEEECCCT-----TTHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCCEEEEECCH-----HHHHHHHHHHHCCCEE
T ss_conf 9999999998799999994888-----7899999997379979
No 12
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=42.59 E-value=9.8 Score=16.60 Aligned_cols=38 Identities=21% Similarity=0.373 Sum_probs=27.0
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999997799799983898631225999999999658789
Q gi|254780245|r 78 GNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 78 G~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
+++|++.+.+.||+.|..=-|+ .+-.|.|++++.||+|
T Consensus 8 ~d~l~~~L~~~Gv~~vFg~pG~-----~~~~l~~al~~~~i~~ 45 (181)
T d1ozha2 8 ADLVVSQLEAQGVRQVFGIPGA-----KIDKVFDSLLDSSIRI 45 (181)
T ss_dssp HHHHHHHHHHHTCCEEEEECCT-----TTHHHHHHGGGSSSEE
T ss_pred HHHHHHHHHHCCCCEEEEECCH-----HHHHHHHHHHHHHCCC
T ss_conf 9999999998799999993857-----4899999998640112
No 13
>d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.70 E-value=17 Score=15.20 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=31.0
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCH-HHHHHHHHHHHHCCCCC
Q ss_conf 9999999977997999838986312-25999999999658789
Q gi|254780245|r 79 NLLVERAVKVGVKSVYFDRGKHLYC-GRIAALADAVRKGGVSF 120 (120)
Q Consensus 79 ~~ia~r~~~~gI~~v~FDR~g~~yH-Grvka~ad~~R~~Gl~F 120 (120)
+.|.+.+.+-+|+.|+|.+.--.|. -|-+.+.+.+.++|++|
T Consensus 79 ~~l~~l~~~~~i~~v~~n~~~~~~e~~rd~~v~~~l~~~gi~~ 121 (185)
T d1u3da2 79 ASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAV 121 (185)
T ss_dssp HHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 9999999851972698850530888988998878899749841
No 14
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.79 E-value=18 Score=15.11 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEECCCC--CCC--HHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999997799799983898--631--225999999999658789
Q gi|254780245|r 75 TAVGNLLVERAVKVGVKSVYFDRGK--HLY--CGRIAALADAVRKGGVSF 120 (120)
Q Consensus 75 ~~vG~~ia~r~~~~gI~~v~FDR~g--~~y--HGrvka~ad~~R~~Gl~F 120 (120)
+..|..+++.+.++|..+|.|=.+. ... +-|...|.+++.+.|++.
T Consensus 100 ~~~g~~~~~~L~~~g~~~i~~i~~~~~~~~~~~~r~~g~~~~~~~~~i~~ 149 (255)
T d1byka_ 100 EGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHP 149 (255)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCTTSTTTTHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 79999999999985125432357774455077777667999999739986
No 15
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}
Probab=27.77 E-value=18 Score=15.00 Aligned_cols=24 Identities=21% Similarity=0.263 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 999999999977997999838986
Q gi|254780245|r 77 VGNLLVERAVKVGVKSVYFDRGKH 100 (120)
Q Consensus 77 vG~~ia~r~~~~gI~~v~FDR~g~ 100 (120)
+|.-||.++.++|.+-++|||...
T Consensus 13 MG~~mA~~L~~~G~~V~v~dr~~~ 36 (176)
T d2pgda2 13 MGQNLILNMNDHGFVVCAFNRTVS 36 (176)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSTH
T ss_pred HHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 999999999978996999819989
No 16
>d1aila_ a.16.1.1 (A:) N-terminal, RNA-binding domain of nonstructural protein NS1 {Influenza A virus [TaxId: 11320]}
Probab=27.66 E-value=18 Score=14.99 Aligned_cols=20 Identities=55% Similarity=0.728 Sum_probs=17.3
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 86678999999999999997
Q gi|254780245|r 68 GANIVAATAVGNLLVERAVK 87 (120)
Q Consensus 68 ~~ni~aA~~vG~~ia~r~~~ 87 (120)
+-+|+.|..+|+.|.|++++
T Consensus 51 gldie~aT~~Gkqive~il~ 70 (70)
T d1aila_ 51 GLNIEAATHVGKQIVEKILK 70 (70)
T ss_dssp TCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHC
T ss_conf 40306888877999999859
No 17
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.56 E-value=19 Score=14.87 Aligned_cols=28 Identities=14% Similarity=0.064 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 66789999999999999977997999838
Q gi|254780245|r 69 ANIVAATAVGNLLVERAVKVGVKSVYFDR 97 (120)
Q Consensus 69 ~ni~aA~~vG~~ia~r~~~~gI~~v~FDR 97 (120)
.+-++-.-+-..+ +...+-||.-+-+|=
T Consensus 124 ~~p~~~~~~~~~~-~~~~~~Gvd~~K~D~ 151 (348)
T d1zy9a2 124 SKDEVLNWLFDLF-SSLRKMGYRYFKIDF 151 (348)
T ss_dssp TCHHHHHHHHHHH-HHHHHTTCCEEEECC
T ss_pred CCHHHHHHHHHHH-HHHHHCCCCEEEECC
T ss_conf 9678999999999-999866999899678
No 18
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.84 E-value=21 Score=14.68 Aligned_cols=39 Identities=28% Similarity=0.424 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCCC
Q ss_conf 999999999977997999838986312259999999996-58789
Q gi|254780245|r 77 VGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRK-GGVSF 120 (120)
Q Consensus 77 vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~-~Gl~F 120 (120)
+|+.|++.+.+.||+.|.-=-|+ .+-.|.|++.+ .|+.|
T Consensus 5 ~~~~i~~~L~~~Gv~~vFgipG~-----~~~~l~~al~~~~~i~~ 44 (180)
T d1pvda2 5 LGKYLFERLKQVNVNTVFGLPGD-----FNLSLLDKIYEVEGMRW 44 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCT-----TTHHHHHGGGGSTTCEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCC-----CHHHHHHHHHHHCCEEE
T ss_conf 99999999998799999990780-----27999999987266378
No 19
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.26 E-value=21 Score=14.61 Aligned_cols=42 Identities=21% Similarity=0.392 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999779979998389863122599999999965878
Q gi|254780245|r 74 ATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVS 119 (120)
Q Consensus 74 A~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~ 119 (120)
+.-+|..+|+.+.+.|.+-+..||+. -.+.++++.+++.|.+
T Consensus 11 s~GIG~aia~~la~~Ga~V~i~~r~~----~~l~~~~~~l~~~g~~ 52 (257)
T d2rhca1 11 TSGIGLEIARRLGKEGLRVFVCARGE----EGLRTTLKELREAGVE 52 (257)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHHHHCCCC
T ss_conf 87999999999998799999998988----9999999999961994
No 20
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.07 E-value=21 Score=14.59 Aligned_cols=37 Identities=24% Similarity=0.221 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999999779979998389863122599999999965
Q gi|254780245|r 76 AVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKG 116 (120)
Q Consensus 76 ~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~ 116 (120)
-+|.-||+.+.+.|-+-++++|... ++.++++.+.+.
T Consensus 11 ~iG~alA~~la~~G~~V~l~~R~~e----~~~~l~~~i~~~ 47 (212)
T d1jaya_ 11 NLGKGLALRLATLGHEIVVGSRREE----KAEAKAAEYRRI 47 (212)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHHC
T ss_conf 9999999999987998999979999----999999999853
No 21
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=23.75 E-value=22 Score=14.55 Aligned_cols=47 Identities=15% Similarity=0.239 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 78999999999999997799799983898631225999999999658789
Q gi|254780245|r 71 IVAATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 71 i~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
-..+++=...|-+.+++.|++.|. .||=|=--=..||+.+.++||.|
T Consensus 55 ~~~sYln~~~Ii~~A~~~~~daih---PGyGFLSEna~Fa~~~~~~gi~F 101 (114)
T d1ulza2 55 PLDTYLNKQRIINLALEVGADAIH---PGYGFLAENAEFAKMCEEAGITF 101 (114)
T ss_dssp TTHHHHCHHHHHHHHHHTTCCEEE---CCSSTTTTCHHHHHHHHHTTCEE
T ss_pred HHHHHHCHHHHHHHHHHHCCCEEE---CCHHHHHHHHHHHHHHHHCCCEE
T ss_conf 355252679999999996997676---33465505899999999879989
No 22
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=23.45 E-value=22 Score=14.52 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHCCCCEEEECCC
Q ss_conf 9999999999779979998389
Q gi|254780245|r 77 VGNLLVERAVKVGVKSVYFDRG 98 (120)
Q Consensus 77 vG~~ia~r~~~~gI~~v~FDR~ 98 (120)
+|..+|+.+.+.|.+-+++||+
T Consensus 13 ~G~~~a~~L~~~g~~V~v~dr~ 34 (182)
T d1e5qa1 13 VTRPTLDVLTDSGIKVTVACRT 34 (182)
T ss_dssp THHHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEECC
T ss_conf 9999999998497979999897
No 23
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.27 E-value=22 Score=14.50 Aligned_cols=42 Identities=29% Similarity=0.411 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999977997999838986312259999999996587
Q gi|254780245|r 73 AATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGV 118 (120)
Q Consensus 73 aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl 118 (120)
++.-||..+|+++.+.|.+-|..||+. .++.++++.+.+.|.
T Consensus 18 as~GIG~aiA~~la~~G~~Vv~~~r~~----~~l~~~~~~l~~~~~ 59 (257)
T d1xg5a_ 18 ASGGIGAAVARALVQQGLKVVGCARTV----GNIEELAAECKSAGY 59 (257)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHHHHCCC
T ss_conf 988899999999998799999997988----999999999985699
No 24
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}
Probab=21.50 E-value=24 Score=14.28 Aligned_cols=38 Identities=29% Similarity=0.371 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 78999999999999997799799983898631225999999999658
Q gi|254780245|r 71 IVAATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGG 117 (120)
Q Consensus 71 i~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~G 117 (120)
.+.|+.+|+.||+ .|+. +++ ||+ .|--.++|++++++|
T Consensus 19 ~~~a~~lG~~la~----~g~~-lv~--GGg--~G~M~a~a~ga~~~g 56 (171)
T d1weha_ 19 YARWVRYGEVLAE----EGFG-LAC--GGY--QGGMEALARGVKAKG 56 (171)
T ss_dssp HHHHHHHHHHHHH----TTEE-EEE--CCS--STHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH----CCCC-EEE--CCC--HHHHHHHHHHHHHCC
T ss_conf 9999999999998----8996-453--760--678999999987535
No 25
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=20.80 E-value=25 Score=14.19 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCCC
Q ss_conf 999999999977997999838986312259999999996-58789
Q gi|254780245|r 77 VGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRK-GGVSF 120 (120)
Q Consensus 77 vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~-~Gl~F 120 (120)
+++.|++.+++.||+.|.-=-| +.+-.|.|++.+ .|++|
T Consensus 5 vad~iv~~L~~~GV~~vFg~pG-----~~~~~l~~al~~~~~i~~ 44 (178)
T d1ovma2 5 VADYLLDRLTDCGADHLFGVPG-----DYNLQFLDHVIDSPDICW 44 (178)
T ss_dssp HHHHHHHHHHHTTCCEEEECCC-----GGGHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHCCCCEEEEECC-----HHHHHHHHHHHHCCCEEE
T ss_conf 9999999999879999999478-----508999999986798289
No 26
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=20.69 E-value=25 Score=14.18 Aligned_cols=39 Identities=21% Similarity=0.350 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHH--HHCCCCC
Q ss_conf 9999999999779979998389863122599999999--9658789
Q gi|254780245|r 77 VGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAV--RKGGVSF 120 (120)
Q Consensus 77 vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~--R~~Gl~F 120 (120)
+|+.|++.+.+.||+.|.-=-|+ -+-.|.|++ .+.|++|
T Consensus 6 ~~~~i~~~L~~~GV~~vFgipG~-----~~~~l~dal~~~~~~i~~ 46 (184)
T d2djia2 6 IGLAVMKILESWGADTIYGIPSG-----TLSSLMDAMGEEENNVKF 46 (184)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCT-----TTHHHHTTSSSTTCCCEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCH-----HHHHHHHHHHHCCCCCEE
T ss_conf 99999999998799899997876-----079999999851698289
No 27
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}
Probab=20.67 E-value=25 Score=14.18 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 789999999999999977997999838986312259999999996587
Q gi|254780245|r 71 IVAATAVGNLLVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGV 118 (120)
Q Consensus 71 i~aA~~vG~~ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl 118 (120)
.++|+.+|+.||+. |+. +++ ||.. |--.|+|+++.++|=
T Consensus 51 y~~A~~LG~~La~~----g~~-lv~--GGg~--GlMgava~ga~~~gG 89 (208)
T d1weka_ 51 YEAGYRLGRALAEA----GFG-VVT--GGGP--GVMEAVNRGAYEAGG 89 (208)
T ss_dssp HHHHHHHHHHHHHH----TCE-EEE--CSCS--HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHC----CCE-EEE--CCCC--HHHHHHHHHHHHCCC
T ss_conf 99999999999957----452-786--7883--277798732343288
No 28
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.50 E-value=25 Score=14.16 Aligned_cols=57 Identities=16% Similarity=0.157 Sum_probs=40.1
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--EEC-C-CCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 0000134686678999999999999997799799--983-8-9863122599999999965878
Q gi|254780245|r 60 PLRSSLKTGANIVAATAVGNLLVERAVKVGVKSV--YFD-R-GKHLYCGRIAALADAVRKGGVS 119 (120)
Q Consensus 60 ~~~~~~~~~~ni~aA~~vG~~ia~r~~~~gI~~v--~FD-R-~g~~yHGrvka~ad~~R~~Gl~ 119 (120)
++++..+..=|-+-+..+|.-++...++.+...| -+| | ++. --..+++.++.++|++
T Consensus 10 dIRGi~~~~lt~~~~~~ig~a~~~~~~~~~~~~VvIg~D~R~ss~---~~~~~~~~gl~~~G~~ 70 (146)
T d1p5dx1 10 DIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGP---ELVKQLIQGLVDCGCQ 70 (146)
T ss_dssp SEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEECSCTTHH---HHHHHHHHHHHTBTCE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH---HHHHHHHEEECCCCEE
T ss_conf 770257999699999999999999987559988999977864401---6665322065057648
No 29
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.23 E-value=26 Score=14.12 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=32.9
Q ss_pred HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999997799799983898631225999999999658789
Q gi|254780245|r 81 LVERAVKVGVKSVYFDRGKHLYCGRIAALADAVRKGGVSF 120 (120)
Q Consensus 81 ia~r~~~~gI~~v~FDR~g~~yHGrvka~ad~~R~~Gl~F 120 (120)
..+.+...|+..|.+--+...+-..+.++++-+++.|+.+
T Consensus 85 ~i~~A~~LG~~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l 124 (250)
T d1yx1a1 85 TLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQL 124 (250)
T ss_dssp HHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 9999997379979995255641678999999999709989
Done!