HHsearch alignment for GI: 254780246 and conserved domain: COG0097
>COG0097 RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=413.08 Aligned_cols=175 Identities=53% Similarity=0.872 Sum_probs=169.0
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCE-EEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEEC
Q ss_conf 97444645107997589997998999906946999826863-99970758998505543220133888752112589751
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGI-SVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGV 79 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v-~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GV 79 (177)
T Consensus 1 Msri~k~~i~~P~gV~V~i~~~~v~vkGpkGeL~~~~~~~~v~v~~~~~~~vv~~~~~-k~~~a~~Gt~rali~Nmv~GV 79 (178)
T COG0097 1 MSRIGKRPIVIPAGVTVSIEGQVVTVKGPKGELTREFHDNVVKVEVEDNILVVRPVDG-KRKRALHGTVRALINNMVKGV 79 (178)
T ss_pred CCCEEECCEECCCCEEEEEECCEEEEECCCEEEEEECCCCCEEEEECCCEEEEEECCC-CHHHHHHHHHHHHHHHHHHHC
T ss_conf 9720112373599709998454999987880899990686059994299799964666-045788999999998776010
Q ss_pred CEEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 10037778740476301220424999951567655258850389976998899995799898799987410074798578
Q gi|254780246|r 80 TKGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKG 159 (177)
Q Consensus 80 t~Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKG 159 (177)
T Consensus 80 teGf~~kL~ivgvgyra~v~g~~l~l~LG~shp~~~~ip~gi~v~v~~~t~I~v~GidKe~VGQ~AA~Ir~~r~pepykg 159 (178)
T COG0097 80 TEGFEKKLEIVGVGYRAQVVGGNLELFLGYSHPVVIEIPEGITVEVPGPTEIVVEGIDKELVGQVAANIRAARKPEPYKG 159 (178)
T ss_pred CCCEEEEEEEEEECCEEEEECCEEEEEECCCCCEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 41529999999824135873466899122558768789998599926998899984889997688998873269989788
Q ss_pred CCEEECCEEEEEEECCC
Q ss_conf 74345370999710566
Q gi|254780246|r 160 KGIRYSGEVIIRKEGKK 176 (177)
Q Consensus 160 KgI~~~~e~I~~KegKk 176 (177)
T Consensus 160 Kgi~ydge~I~~K~gK~ 176 (178)
T COG0097 160 KGIRYDGEYIRRKEGKT 176 (178)
T ss_pred CCEEECCEEEEEECCCC
T ss_conf 61678688999835524