HHsearch alignment for GI: 254780246 and conserved domain: PRK05498

>PRK05498 rplF 50S ribosomal protein L6; Validated.
Probab=100.00  E-value=0  Score=468.94  Aligned_cols=177  Identities=58%  Similarity=0.929  Sum_probs=175.7

Q ss_pred             CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECC
Q ss_conf             97444645107997589997998999906946999826863999707589985055432201338887521125897511
Q gi|254780246|r    1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVT   80 (177)
Q Consensus         1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt   80 (177)
T Consensus         1 MSrigk~pI~IP~gV~v~i~~~~v~vkGp~G~l~~~~~~~i~i~~~~~~I~v~~~~~~k~~kal~GT~rslI~NmI~GVs   80 (178)
T PRK05498          1 MSRIGKKPIAIPAGVEVTINGNVVTVKGPKGELSRTLNPDVTVKVEDNELTVTRPDDSKEARALHGTTRALINNMVVGVT   80 (178)
T ss_pred             CCCCCCCCEECCCCCEEEEECCEEEEECCCEEEEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             98355686416999899997999999989957989869984999969989997668778899999999999878774323


Q ss_pred             EEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             00377787404763012204249999515676552588503899769988999957998987999874100747985787
Q gi|254780246|r   81 KGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGK  160 (177)
Q Consensus        81 ~Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGK  160 (177)
T Consensus        81 ~Gf~k~LelvGvGYra~~~g~~L~l~LGfSH~i~~~IP~~v~v~~~~~t~I~i~G~DKq~vgq~AA~Ir~~r~pepYKGK  160 (178)
T PRK05498         81 EGFEKKLEIVGVGYRAQLQGKKLNLSLGYSHPVEYEIPEGITVEVPKPTEIVVKGIDKQLVGQVAAEIRSYRPPEPYKGK  160 (178)
T ss_pred             CCEEEEEEEEEEEEEEEECCCEEEEEECCCCCEECCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             01589999996203888638789997346775601189983999489999999978999998999998636999896997


Q ss_pred             CEEECCEEEEEEECCCC
Q ss_conf             43453709997105669
Q gi|254780246|r  161 GIRYSGEVIIRKEGKKK  177 (177)
Q Consensus       161 gI~~~~e~I~~KegKkK  177 (177)
T Consensus       161 GI~~~~e~i~~K~gKkk  177 (178)
T PRK05498        161 GIRYAGEVVRRKEGKKK  177 (178)
T ss_pred             CEEECCEEEEECCCCCC
T ss_conf             77188869996175579