HHsearch alignment for GI: 254780246 and conserved domain: PRK05498
>PRK05498 rplF 50S ribosomal protein L6; Validated.
Probab=100.00 E-value=0 Score=468.94 Aligned_cols=177 Identities=58% Similarity=0.929 Sum_probs=175.7
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECC
Q ss_conf 97444645107997589997998999906946999826863999707589985055432201338887521125897511
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVT 80 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt 80 (177)
T Consensus 1 MSrigk~pI~IP~gV~v~i~~~~v~vkGp~G~l~~~~~~~i~i~~~~~~I~v~~~~~~k~~kal~GT~rslI~NmI~GVs 80 (178)
T PRK05498 1 MSRIGKKPIAIPAGVEVTINGNVVTVKGPKGELSRTLNPDVTVKVEDNELTVTRPDDSKEARALHGTTRALINNMVVGVT 80 (178)
T ss_pred CCCCCCCCEECCCCCEEEEECCEEEEECCCEEEEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98355686416999899997999999989957989869984999969989997668778899999999999878774323
Q ss_pred EEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00377787404763012204249999515676552588503899769988999957998987999874100747985787
Q gi|254780246|r 81 KGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGK 160 (177)
Q Consensus 81 ~Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGK 160 (177)
T Consensus 81 ~Gf~k~LelvGvGYra~~~g~~L~l~LGfSH~i~~~IP~~v~v~~~~~t~I~i~G~DKq~vgq~AA~Ir~~r~pepYKGK 160 (178)
T PRK05498 81 EGFEKKLEIVGVGYRAQLQGKKLNLSLGYSHPVEYEIPEGITVEVPKPTEIVVKGIDKQLVGQVAAEIRSYRPPEPYKGK 160 (178)
T ss_pred CCEEEEEEEEEEEEEEEECCCEEEEEECCCCCEECCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 01589999996203888638789997346775601189983999489999999978999998999998636999896997
Q ss_pred CEEECCEEEEEEECCCC
Q ss_conf 43453709997105669
Q gi|254780246|r 161 GIRYSGEVIIRKEGKKK 177 (177)
Q Consensus 161 gI~~~~e~I~~KegKkK 177 (177)
T Consensus 161 GI~~~~e~i~~K~gKkk 177 (178)
T PRK05498 161 GIRYAGEVVRRKEGKKK 177 (178)
T ss_pred CEEECCEEEEECCCCCC
T ss_conf 77188869996175579