HHsearch alignment for GI: 254780246 and conserved domain: PRK05518
>PRK05518 rpl6p 50S ribosomal protein L6P; Reviewed.
Probab=100.00 E-value=0 Score=405.63 Aligned_cols=173 Identities=31% Similarity=0.476 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEC-CCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEEC
Q ss_conf 97444645107997589997998999906946999826-86399970758998505543220133888752112589751
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMS-DGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGV 79 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~-~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GV 79 (177)
T Consensus 2 msr~~Kk~I~IP~gV~V~i~~~~i~VkGpkG~L~~~~~~~~v~i~~~~~~i~v~~~~~~kk~~a~~Gt~RslI~NMI~GV 81 (181)
T PRK05518 2 VAAEIREEIEIPEGVTVEIEGNEVTVKGPKGEVERDFWYPGIKISVEDGKVVIETSFPRKKQKAIVGTFRSHIKNMIKGV 81 (181)
T ss_pred CCHHCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHEEEEE
T ss_conf 41423788248999799998999999968958999944885899990997999808998889999999999986317995
Q ss_pred CEEEEEEEEEECCCC--EEEECCCEEEEE--ECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCC
Q ss_conf 100377787404763--012204249999--5156765525885038997699889999579989879998741007479
Q gi|254780246|r 80 TKGYERKLEISGVGC--RAFMDGRNLKMS--LGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAE 155 (177)
Q Consensus 80 t~Gf~~~L~lvgvgy--~v~~~g~~l~l~--LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pe 155 (177)
T Consensus 82 s~Gf~k~LeivGvGy~~~a~~~G~~l~l~n~lG~sh~i~~~iP~gv~v~v-~~~~I~i~G~DKq~VGq~AA~Ir~~rk~k 160 (181)
T PRK05518 82 TEGFEYKMKIVYAHFPMQVKVKGDEVVIENFLGEKAPRRAKILGGVKVKV-KGEEVTVSGIDKEDVGQTAANIEQATKIK 160 (181)
T ss_pred CCCEEEEEEEEEECCCEEEEECCCEEEEEEEEECCCCEEEECCCCCEEEE-CCCEEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf 68879999999876506899939889997620513257876989949997-29999999788999859998643216798
Q ss_pred CCCCCCEEECCEEEEEEECC
Q ss_conf 85787434537099971056
Q gi|254780246|r 156 PYKGKGIRYSGEVIIRKEGK 175 (177)
Q Consensus 156 pYKGKgI~~~~e~I~~KegK 175 (177)
T Consensus 161 ~~~~r-if~dG~yi~~K~gk 179 (181)
T PRK05518 161 GFDPR-VFQDGIYIVEKAVK 179 (181)
T ss_pred CCCCC-EEECCEEEEECCCC
T ss_conf 99977-93747899971766