HHsearch alignment for GI: 254780246 and conserved domain: PTZ00179
>PTZ00179 60S ribosomal protein L9; Provisional.
Probab=100.00 E-value=0 Score=287.87 Aligned_cols=170 Identities=20% Similarity=0.288 Sum_probs=151.9
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEC-CCEEEEE--ECCEEEEEECCCCCCCHHHHHHHHHEEEEEEE
Q ss_conf 97444645107997589997998999906946999826-8639997--07589985055432201338887521125897
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMS-DGISVTL--QEGMLSVATINGSKKARAAWGMSRTMINNLFH 77 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~-~~v~i~~--~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~ 77 (177)
T Consensus 1 m~i~~~e~I~IPegV~vtv~~~~VtVkGp~G~L~r~f~h~~v~i~i~~~~~~i~v~~~~~~rk~~A~igT~~shI~NMik 80 (189)
T PTZ00179 1 MKIKSQDTITIPEDVTVSVKDRIVTVKGKRGTLTKDLRHLQLDFRVNKKNRTFTAVRWFGSKIPNSTINTALSHVRNMIT 80 (189)
T ss_pred CCCCCCCEEECCCCCEEEEECCEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCHHHEEEHHHHHHHHHHHHH
T ss_conf 91235516889999899998999999989958998955695799995797489998737874140004619999998775
Q ss_pred ECCEEEEEEEEEE--CCCCEEEECCCEEEE--EECCCCCCCCCCCCEEEEEEC----CCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 5110037778740--476301220424999--951567655258850389976----99889999579989879998741
Q gi|254780246|r 78 GVTKGYERKLEIS--GVGCRAFMDGRNLKM--SLGFSHDVLYTPLEGISIFVS----KPTEIIVSGIDKQKVGHVAAEIR 149 (177)
Q Consensus 78 GVt~Gf~~~L~lv--gvgy~v~~~g~~l~l--~LG~sh~i~~~ip~~v~v~~~----k~~~I~i~G~dke~Vgq~AA~Ir 149 (177)
T Consensus 81 GVT~Gf~Ykmk~vyaHFPi~v~v~G~~v~I~NFlGEK~~R~~~i~~gv~v~~~~~~~~kdei~i~G~d~E~V~qtAA~Ie 160 (189)
T PTZ00179 81 GVTKGFRFKVRFAYAHFPISVSVENQLVEIRNFLGEKRVRRQVVADTVKVYRTDPSKVKDELVLEGNDLEQVSREAAVMH 160 (189)
T ss_pred HCCCCEEEEEEEEEEECCEEEEECCCEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 30187499999998756569998698999981246520258876899589850565558789998178899657798877
Q ss_pred CCCCCCCCCCCC--EEECCEEEEEEE
Q ss_conf 007479857874--345370999710
Q gi|254780246|r 150 SYRSAEPYKGKG--IRYSGEVIIRKE 173 (177)
Q Consensus 150 ~~r~pepYKGKg--I~~~~e~I~~Ke 173 (177)
T Consensus 161 q~t~v---k~kD~R~F~DGIYv~eK~ 183 (189)
T PTZ00179 161 QLCLV---KKKDIRKFLDGIYVQTKT 183 (189)
T ss_pred HHHCC---CCCCCCEECCCEEEEECC
T ss_conf 64126---799665802677999755