HHsearch alignment of GI: 254780246 and MMDB domain: 1rl6_A_81-177
>1rl6_A (A:81-177) Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.7e-39 Score=249.31 Aligned_cols=96 Identities=55% Similarity=0.893 Sum_probs=95.0
Q ss_pred EEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 03777874047630122042499995156765525885038997699889999579989879998741007479857874
Q gi|254780246|r 82 GYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKG 161 (177)
Q Consensus 82 Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGKg 161 (177)
||+++|+++|+||||+++++.|.|+|||||++.+.||++++++|++||.|+|+|+|||.|+||||+||++|+||||||||
T Consensus 1 Gf~~~LelvGvGYra~~~~~~L~l~LG~SH~i~~~iP~~i~v~~~k~t~i~i~g~dKq~vg~fAa~Ir~~R~pepYKGKG 80 (97)
T 1rl6_A 1 GYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKG 80 (97)
T ss_dssp CEEEEEEEESTTCEEEEETTEEEEESSSSSCEEECCCTTEEEEEEETTEEEEEESCHHHHHHHHHHHHTTSCCCTTTCCE
T ss_pred CCEEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 50789998516522560497999971655453235899779995478500685168999999999987307998845998
Q ss_pred EEECCEEEEEEECCCC
Q ss_conf 3453709997105669
Q gi|254780246|r 162 IRYSGEVIIRKEGKKK 177 (177)
Q Consensus 162 I~~~~e~I~~KegKkK 177 (177)
|||+||+|.||||||+
T Consensus 81 I~y~~E~i~~K~gKk~ 96 (97)
T 1rl6_A 81 IRYEGELVRLKEGKTG 96 (97)
T ss_dssp EEETTCCCCC------
T ss_pred CCCCCEEEEECCCCCC
T ss_conf 6687869997375578