HHsearch alignment of GI: 254780246 and MMDB domain: 1rl6_A_81-177

>1rl6_A (A:81-177) Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus}
Probab=100.00  E-value=1.7e-39  Score=249.31  Aligned_cols=96  Identities=55%  Similarity=0.893  Sum_probs=95.0

Q ss_pred             EEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             03777874047630122042499995156765525885038997699889999579989879998741007479857874
Q gi|254780246|r   82 GYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKG  161 (177)
Q Consensus        82 Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGKg  161 (177)
                      ||+++|+++|+||||+++++.|.|+|||||++.+.||++++++|++||.|+|+|+|||.|+||||+||++|+||||||||
T Consensus         1 Gf~~~LelvGvGYra~~~~~~L~l~LG~SH~i~~~iP~~i~v~~~k~t~i~i~g~dKq~vg~fAa~Ir~~R~pepYKGKG   80 (97)
T 1rl6_A            1 GYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKG   80 (97)
T ss_dssp             CEEEEEEEESTTCEEEEETTEEEEESSSSSCEEECCCTTEEEEEEETTEEEEEESCHHHHHHHHHHHHTTSCCCTTTCCE
T ss_pred             CCEEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             50789998516522560497999971655453235899779995478500685168999999999987307998845998


Q ss_pred             EEECCEEEEEEECCCC
Q ss_conf             3453709997105669
Q gi|254780246|r  162 IRYSGEVIIRKEGKKK  177 (177)
Q Consensus       162 I~~~~e~I~~KegKkK  177 (177)
                      |||+||+|.||||||+
T Consensus        81 I~y~~E~i~~K~gKk~   96 (97)
T 1rl6_A           81 IRYEGELVRLKEGKTG   96 (97)
T ss_dssp             EEETTCCCCC------
T ss_pred             CCCCCEEEEECCCCCC
T ss_conf             6687869997375578