HHsearch alignment of GI: 254780246 and MMDB domain: 1vq8_E_80-178
>1vq8_E (E:80-178) 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=99.81 E-value=1.2e-19 Score=133.88 Aligned_cols=90 Identities=24% Similarity=0.312 Sum_probs=82.6
Q ss_pred EEEEEEEEE--CCCCEEEECCCEEEE--EECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 037778740--476301220424999--9515676552588503899769988999957998987999874100747985
Q gi|254780246|r 82 GYERKLEIS--GVGCRAFMDGRNLKM--SLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPY 157 (177)
Q Consensus 82 Gf~~~L~lv--gvgy~v~~~g~~l~l--~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepY 157 (177)
||+|+|+++ |||+.+.++|+.+++ +||+..++.+.+++||++++.+ ++|+|+|+|+|.|+|+||+|++.++.
T Consensus 1 Gf~Ykmk~vYaHFPi~v~v~g~~v~I~NFlGEK~~R~~~i~~gv~v~~~k-deiii~G~d~E~VsqtAA~I~qat~v--- 76 (99)
T 1vq8_E 1 GWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDG-EELTVSGPDIEAVGQTAADIEQLTRI--- 76 (99)
T ss_dssp CEEEEEEEECSSSCCEEEEETTEEEEESGGGCSSCEEEECCTTCEEEEET-TEEEEEESCHHHHHHHHHHHHHTTCC---
T ss_pred CEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCEEEECCCCCEEEECC-CEEEEEECCHHHHHHHHHHHHCCCCC---
T ss_conf 34899999988740046427871456012564032466668985356647-65999958999998999997447999---
Q ss_pred CCCCE--EECCEEEEEEECC
Q ss_conf 78743--4537099971056
Q gi|254780246|r 158 KGKGI--RYSGEVIIRKEGK 175 (177)
Q Consensus 158 KGKgI--~~~~e~I~~KegK 175 (177)
|+||+ |+||+||..|...
T Consensus 77 k~kD~R~FlDGIYv~eK~~i 96 (99)
T 1vq8_E 77 NDKDVRVFQDGVYITRKPNR 96 (99)
T ss_dssp SSSCTTTCCCEEEEEECC--
T ss_pred CCCCCEEEECCEEEEECCCC
T ss_conf 99971184378899986887