HHsearch alignment of GI: 254780246 and MMDB domain: 2j01_H_1-81

>2j01_H (H:1-81) 50S ribosomal protein L6; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=99.93  E-value=6.3e-28  Score=182.07  Aligned_cols=81  Identities=40%  Similarity=0.680  Sum_probs=80.1

Q ss_pred             CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECC
Q ss_conf             97444645107997589997998999906946999826863999707589985055432201338887521125897511
Q gi|254780246|r    1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVT   80 (177)
Q Consensus         1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt   80 (177)
                      ||||||+||.||++|+++++++.++|+||+|+|++.|++.+.+.++++.+.+.+++++++++|||||+||||+|||+|||
T Consensus         1 MSrIgk~pI~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~~~~~~~~i~v~~~~~~kk~~a~~GT~rsli~Nmi~GVt   80 (81)
T 2j01_H            1 MSRIGRLPIPVPKGVSVEVAPGRVKVKGPKGELEVPVSPEMRVVVEEGVVRVERPSDERRHKSLHGLTRTLIANAVKGVS   80 (81)
T ss_dssp             -----------CTTCEEEECSSCEEEECSSCCEECCCCSSSCCCCCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             97245787106999889997999999839988999953454321035215898415404678999999999998878750


Q ss_pred             E
Q ss_conf             0
Q gi|254780246|r   81 K   81 (177)
Q Consensus        81 ~   81 (177)
                      +
T Consensus        81 e   81 (81)
T 2j01_H           81 E   81 (81)
T ss_dssp             T
T ss_pred             C
T ss_conf             7