HHsearch alignment of GI: 254780246 and MMDB domain: 2j01_H_1-81
>2j01_H (H:1-81) 50S ribosomal protein L6; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=99.93 E-value=6.3e-28 Score=182.07 Aligned_cols=81 Identities=40% Similarity=0.680 Sum_probs=80.1
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECC
Q ss_conf 97444645107997589997998999906946999826863999707589985055432201338887521125897511
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVT 80 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt 80 (177)
||||||+||.||++|+++++++.++|+||+|+|++.|++.+.+.++++.+.+.+++++++++|||||+||||+|||+|||
T Consensus 1 MSrIgk~pI~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~~~~~~~~i~v~~~~~~kk~~a~~GT~rsli~Nmi~GVt 80 (81)
T 2j01_H 1 MSRIGRLPIPVPKGVSVEVAPGRVKVKGPKGELEVPVSPEMRVVVEEGVVRVERPSDERRHKSLHGLTRTLIANAVKGVS 80 (81)
T ss_dssp -----------CTTCEEEECSSCEEEECSSCCEECCCCSSSCCCCCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97245787106999889997999999839988999953454321035215898415404678999999999998878750
Q ss_pred E
Q ss_conf 0
Q gi|254780246|r 81 K 81 (177)
Q Consensus 81 ~ 81 (177)
+
T Consensus 81 e 81 (81)
T 2j01_H 81 E 81 (81)
T ss_dssp T
T ss_pred C
T ss_conf 7