HHsearch results for GI: 254780246 and protein with PDBid: 2zjr_E
>2zjr_E 50S ribosomal protein L6; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.141.1.1 d.141.1.1 PDB: 1nwx_E* 1xbp_E* 2zjp_E* 2zjq_E 1nwy_E 3cf5_E* 3dll_E* 1pnu_E 1pny_E 1vor_H 1vou_H 1vow_H 1voy_H 1vp0_H
Probab=100.00 E-value=0 Score=434.44 Aligned_cols=176 Identities=45% Similarity=0.748 Sum_probs=174.2
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECC
Q ss_conf 97444645107997589997998999906946999826863999707589985055432201338887521125897511
Q gi|254780246|r 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVT 80 (177)
Q Consensus 1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt 80 (177)
||||||+||.||++|+|+++++.|+|+||+|+|++.+++.+.+.++++++.+.++.++++++|||||+||||+|||+||+
T Consensus 1 MSrigk~pI~IP~~V~v~i~~~~v~vkGp~G~l~~~~~~~v~i~~~~~~i~v~~~~~~k~~kal~gt~rs~i~Nmi~GVs 80 (185)
T 2zjr_E 1 MSRIGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLVANAVKGVS 80 (185)
T ss_dssp ----CCCCBCCCTTCCEECCTTCCEECCSSCCCCCCCCSSSCCBCCSSSBBCCCSSCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCCCCEEEEECCEEEEECCCEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEC
T ss_conf 97245675207999889997999999929834998779974899637614898503114567777779987615448875
Q ss_pred EEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00377787404763012204249999515676552588503899769988999957998987999874100747985787
Q gi|254780246|r 81 KGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGK 160 (177)
Q Consensus 81 ~Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGK 160 (177)
+||+++|+++|+|||++++++.|.|+|||||++.+.||++|+++++++|+|+|+|+|||+||||||+||++|+|||||||
T Consensus 81 ~Gf~~~L~lvgvgf~~~v~~~~l~l~LG~Sh~i~~~iP~~v~v~~~k~t~I~i~G~dke~Vgq~Aa~Ir~~r~pepYKGK 160 (185)
T 2zjr_E 81 DGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGK 160 (185)
T ss_dssp HCEEEEEECBSTTCCCCCBTTBCBCCSSCSSCCBCCCCTTEEEECSSTTEEEEEESSHHHHHHHHHHHHHHTCCCTTTCC
T ss_pred CCCEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 00589999988776230157376677512044465189975899568999999978999999999998624899896898
Q ss_pred CEEECCEEEEEEECCC
Q ss_conf 4345370999710566
Q gi|254780246|r 161 GIRYSGEVIIRKEGKK 176 (177)
Q Consensus 161 gI~~~~e~I~~KegKk 176 (177)
||||+||||.+|||||
T Consensus 161 Gi~~~ge~I~~K~gKk 176 (185)
T 2zjr_E 161 GVRFVGEQIALKAGKA 176 (185)
T ss_dssp BCCCSSCCCCCCCCC-
T ss_pred CCCCCCEEEEEECCCC
T ss_conf 7279798999807544