HHsearch results for GI: 254780246 and protein with PDBid: 3bbo_I

>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}
Probab=100.00  E-value=0  Score=444.33  Aligned_cols=176  Identities=44%  Similarity=0.758  Sum_probs=171.9

Q ss_pred             CCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEEC-CEEEEEECCCCCCCHHHHHHHHHEEEEEEEEC
Q ss_conf             97444645107997589997998999906946999826863999707-58998505543220133888752112589751
Q gi|254780246|r    1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQE-GMLSVATINGSKKARAAWGMSRTMINNLFHGV   79 (177)
Q Consensus         1 MSrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~-~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GV   79 (177)
                      ||||||+||.||+||+|+++++.++|+||+|+|++.+++.+.+..++ +.+.+.+++++++++|||||+||||+|||+||
T Consensus        43 MSRIGK~pI~IP~gV~V~i~~~~i~VkGP~G~L~~~~~~~i~i~~~~~~~i~v~~~~~~kk~kal~GT~rslI~NmI~GV  122 (223)
T 3bbo_I           43 ESRIGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDNMVVGV  122 (223)
T ss_dssp             CCCCCCCCCCCSTTSCEEESSSEEEECCSSCCEEEECCSSCEEEECSSSCEEEECSSCCTTHHHHHHHHTTTTTHHHHHT
T ss_pred             CCHHCCCCEECCCCCEEEEECCEEEEECCCEEEEEEECCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             10327776007999889996999999857989999968974799726619998236563679999999999997676563


Q ss_pred             CEEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             10037778740476301220424999951567655258850389976998899995799898799987410074798578
Q gi|254780246|r   80 TKGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKG  159 (177)
Q Consensus        80 t~Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKG  159 (177)
                      ++||+|+|+++|+|||++++++.|.|+|||||||.+.||++++++++++|+|+|+|+|||+||||||+||++|+||||||
T Consensus       123 t~Gf~k~LelvGvGyra~v~g~~l~l~LG~SHpi~~~IP~gIkv~v~k~t~I~I~GiDKe~Vgq~AA~IRs~R~pepYKG  202 (223)
T 3bbo_I          123 SKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKG  202 (223)
T ss_dssp             TTCEEECEECCSTTCCEEECSSEEEECSSCSSCEEEECCSSEEEECSSTTBCEEEESSSHHHHHHHHHTTSSSCCCTTTC
T ss_pred             HHCEEEEEEECCCCEEEEECCCEEEEEECCCCCEEEECCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             21004899971265179852758999815667638978987279956999999996889999999999971789989688


Q ss_pred             CCEEECCEEEEEEECCC
Q ss_conf             74345370999710566
Q gi|254780246|r  160 KGIRYSGEVIIRKEGKK  176 (177)
Q Consensus       160 KgI~~~~e~I~~KegKk  176 (177)
                      |||||+||+|.||||||
T Consensus       203 KGI~y~~e~I~~K~gKk  219 (223)
T 3bbo_I          203 KGVKYSDEIVRRKEGKA  219 (223)
T ss_dssp             CSCEETTCCCCCCCCCC
T ss_pred             CCCCCCCEEEEEECCCC
T ss_conf             78558884999735665