HHsearch results for GI: 254780246 and protein with PDBid: 3ofq_G

>3ofq_G 50S ribosomal protein L6; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=100.00  E-value=0  Score=437.26  Aligned_cols=176  Identities=41%  Similarity=0.709  Sum_probs=174.6

Q ss_pred             CCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECCE
Q ss_conf             74446451079975899979989999069469998268639997075899850554322013388875211258975110
Q gi|254780246|r    2 SRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVTK   81 (177)
Q Consensus         2 SrIgk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt~   81 (177)
                      |||||+||.||++|+|+++++.++|+||+|+|++.++++++++++++.+.+++++++++++|+|||+||||+|||+||++
T Consensus         1 SrIgk~pI~IP~~V~v~i~~~~v~vkGp~G~l~~~~~~~i~i~~~~~~i~v~~~~~~k~~~a~~Gt~rsli~Nmi~GVt~   80 (176)
T 3ofq_G            1 SRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTE   80 (176)
T ss_dssp             CCSTTCCCCCCSSCCCEECSSEEEECCSSCSCEEEECSSCCCCCTTTCCCCCCCTTCSSCSHHHHHHHHHHHHHHTSSSS
T ss_pred             CCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEECCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             97566670159998999979999999499179999505689998698359983866305689999999999977553205


Q ss_pred             EEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             03777874047630122042499995156765525885038997699889999579989879998741007479857874
Q gi|254780246|r   82 GYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKG  161 (177)
Q Consensus        82 Gf~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGKg  161 (177)
                      ||+++|+++|+||||+++|+.|.|+|||||++.+.+|++++++++++|+|+|+|+|||+||||||+||++|+||||||||
T Consensus        81 Gf~~~L~lvGvgyr~~v~g~~l~l~lG~sh~i~~~iP~~I~v~~~~~t~I~i~G~dKe~Vgq~AA~Ir~~r~pepYKGKG  160 (176)
T 3ofq_G           81 GFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKG  160 (176)
T ss_dssp             CBCCCCCCCSSSCCCCCBTTBCCCCSSSSSCCCCCCCTTCCBCCSSSSCCCBCBSCHHHHTHHHHHHHTTTCCCTTTCCS
T ss_pred             CEEEEEEEEEEEEEEEECCCCCEEEECCCCCEEEECCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             62999999763278896155314673134643320899709998689789999768999999999986047998958986


Q ss_pred             EEECCEEEEEEECCCC
Q ss_conf             3453709997105669
Q gi|254780246|r  162 IRYSGEVIIRKEGKKK  177 (177)
Q Consensus       162 I~~~~e~I~~KegKkK  177 (177)
                      |||+||+|++||||||
T Consensus       161 I~~~~e~I~~K~gKkK  176 (176)
T 3ofq_G          161 VRYADEVVRTKEAKKK  176 (176)
T ss_dssp             CCCSSCCCCCCCCCCC
T ss_pred             CCCCCEEEEECCCCCC
T ss_conf             3687809997166689