HHSEARCH alignment of GI: 254780246 and SCOP domain: d1rl6a1

Alignment

Probab=99.88  E-value=4.9e-24  Score=157.17  Aligned_cols=75  Identities=33%  Similarity=0.665  Sum_probs=73.8

Q ss_pred             CCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECCEE
Q ss_conf             510799758999799899990694699982686399970758998505543220133888752112589751100
Q gi|254780246|r    8 AIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVTKG   82 (177)
Q Consensus         8 ~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt~G   82 (177)
                      ||.||++|+|+++++.++|+||+|+|++.+++.+.++++++.+.+.+++++++++|||||+||||+|||+|||+|
T Consensus         1 PI~IP~gV~v~i~~~~i~vkGpkG~L~~~~~~~v~i~~~~~~i~v~~~~~~k~~~al~GT~rsli~Nmi~GVt~G   75 (75)
T d1rl6a1           1 PIEIPAGVTVTVNGNTVTVKGPKGELTRTFHPDMTITVEGNVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKG   75 (75)
T ss_dssp             CEECCTTCEEEEETTEEEEEETTEEEEEECCTTCEEEEETTEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCCEEEEECCEEEEEECCEEEEEECCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHCEEECCC
T ss_conf             907899969999799999990987799962676899990745787067996778999999999998741522188

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Bacillus stearothermophilus [TaxId: 1422]