HHSEARCH alignment of GI: 254780246 and SCOP domain: d1rl6a2

Alignment
>d1rl6a2 d.141.1.1 (A:82-170) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00  E-value=2.9e-36  Score=228.31  Aligned_cols=89  Identities=54%  Similarity=0.880  Sum_probs=87.3

Q ss_pred             EEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf             37778740476301220424999951567655258850389976998899995799898799987410074798578743
Q gi|254780246|r   83 YERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEGISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKGI  162 (177)
Q Consensus        83 f~~~L~lvgvgy~v~~~g~~l~l~LG~sh~i~~~ip~~v~v~~~k~~~I~i~G~dke~Vgq~AA~Ir~~r~pepYKGKgI  162 (177)
                      |+++|+++|+||||+++|+.|.|+|||||++.+.+|++++++++++|.|+|+|+|||.||||||.||++|+|||||||||
T Consensus         1 f~k~L~lvGVGYra~~~g~~L~l~LGySH~I~~~iP~~i~v~~~~~t~i~i~g~dKq~vg~~aa~Ir~~r~pepYKGKGI   80 (89)
T d1rl6a2           1 YEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKGI   80 (89)
T ss_dssp             EEEEEEEESTTCEEEEETTEEEEESSSSSCEEECCCTTEEEEEEETTEEEEEESCHHHHHHHHHHHHTTSCCCTTTCCEE
T ss_pred             CEEEEEEEEEEEEEEECCCEEEEEEEECCEEEEECCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf             96899999799999965998999995132478858998699926896458997489999999999860689989488777


Q ss_pred             EECCEEEEE
Q ss_conf             453709997
Q gi|254780246|r  163 RYSGEVIIR  171 (177)
Q Consensus       163 ~~~~e~I~~  171 (177)
                      +|+||+|++
T Consensus        81 ~y~~E~Irl   89 (89)
T d1rl6a2          81 RYEGELVRL   89 (89)
T ss_dssp             EETTCCCCC
T ss_pred             EECCEEEEC
T ss_conf             698879849


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Bacillus stearothermophilus [TaxId: 1422]