HHSEARCH alignment of GI: 254780246 and SCOP domain: d2zjre2

Alignment
>d2zjre2 d.141.1.1 (E:5-82) Ribosomal protein L6 {Deinococcus radiodurans [TaxId: 1299]}
Probab=99.87  E-value=2.7e-25  Score=164.54  Aligned_cols=78  Identities=38%  Similarity=0.618  Sum_probs=76.4

Q ss_pred             CCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHEEEEEEEECCEE
Q ss_conf             464510799758999799899990694699982686399970758998505543220133888752112589751100
Q gi|254780246|r    5 GKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKKARAAWGMSRTMINNLFHGVTKG   82 (177)
Q Consensus         5 gk~~I~IP~~V~v~i~~~~i~vkGp~G~l~~~~~~~v~i~~~~~~i~i~~~~~~k~~ka~~GT~rsli~Nmi~GVt~G   82 (177)
                      ||+||.||++|+|+++++.++|+||+|+|++.+++.+.++++++.+.+.+++++++++|||||+||||+|||+|||+|
T Consensus         1 Gk~pI~IP~~V~v~i~~~~v~vkGpkG~l~~~~~~~v~i~~~~~~i~v~~~~~~k~~~a~~GT~rsli~Nmi~GVt~G   78 (78)
T d2zjre2           1 GKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLVANAVKGVSDG   78 (78)
T ss_dssp             CCCCBCCCTTCCEECCTTCCEECCSSCCCCCCCCSSSCCBCCSSSBBCCCSSCSSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCEEEEECCEEEEECCCEEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCC
T ss_conf             997648599979999799999995898899980661999985988999807988778999999999998740634089


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L6
superfamily: Ribosomal protein L6
family: Ribosomal protein L6
domain: Ribosomal protein L6
species: Deinococcus radiodurans [TaxId: 1299]