PSIBLAST alignment of GI: 254780246 and protein with PDB id: 1nkw

>gi|28948924|pdb|1NKW|E Chain E, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Length = 212
>gi|51247377|pdb|1SM1|E Chain E, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin Length = 212
 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 77/169 (45%), Positives = 107/169 (63%)

Query: 1   MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKK 60
           MSRIGK+ I VP GV V  +D   KVKGPKG+L+   +  ++V      L V   + ++K
Sbjct: 28  MSRIGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQK 87

Query: 61  ARAAWGMSRTMINNLFHGVTKGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEG 120
            RA  G++RT++ N   GV+ GY   LE+ GVG RA + G+ L+M++G+SH V+  P  G
Sbjct: 88  HRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAG 147

Query: 121 ISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKGIRYSGEVI 169
           ++  V +PT I VSGIDKQ VG VAA +R  R  + Y GKG+R+ GE I
Sbjct: 148 VTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGKGVRFVGEQI 196