PSIBLAST alignment of GI: 254780246 and protein with PDB id: 1nkw
>gi|28948924|pdb|1NKW|E Chain E, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Length = 212
>gi|51247377|pdb|1SM1|E Chain E, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin Length = 212
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/169 (45%), Positives = 107/169 (63%)
Query: 1 MSRIGKKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMMSDGISVTLQEGMLSVATINGSKK 60
MSRIGK+ I VP GV V +D KVKGPKG+L+ + ++V L V + ++K
Sbjct: 28 MSRIGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQK 87
Query: 61 ARAAWGMSRTMINNLFHGVTKGYERKLEISGVGCRAFMDGRNLKMSLGFSHDVLYTPLEG 120
RA G++RT++ N GV+ GY LE+ GVG RA + G+ L+M++G+SH V+ P G
Sbjct: 88 HRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAG 147
Query: 121 ISIFVSKPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKGIRYSGEVI 169
++ V +PT I VSGIDKQ VG VAA +R R + Y GKG+R+ GE I
Sbjct: 148 VTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGKGVRFVGEQI 196