PSIBLAST alignment of GI: 254780246 and protein with PDB id: 2zkr
gi|187609303|pdb|2ZKR|EE Chain e, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 192
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)
Query: 6 KKAIQVPLGVDVAVEDHEIKVKGPKGQLSFMM-SDGISVTLQEGM---LSVATINGSKKA 61
+ + +P VD+ ++ + VKGP+G L + ++L L V G++K
Sbjct: 7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKE 66
Query: 62 RAAWGMSRTMINNLFHGVTKGYERKLEISGVGCRAFM------DGRNLKMSLGFSHDVLY 115
A + + N+ GVT G+ K+ + ++ LG +
Sbjct: 67 LATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRV 126
Query: 116 TPLEGISIFVS--KPTEIIVSGIDKQKVGHVAAEIRSYRSAEPYKGKGIR--YSGEVIIR 171
G++ VS + E+I+ G D + V + AA I+ A K K IR G +
Sbjct: 127 RMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQ---QATTVKNKDIRKFLDGIYVSE 183
Query: 172 K 172
K
Sbjct: 184 K 184