HHsearch alignment for GI: 254780247 and conserved domain: CHL00042

Probab=100.00  E-value=0  Score=305.05  Aligned_cols=128  Identities=37%  Similarity=0.661  Sum_probs=122.1

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCC--CCEECCCEEEE
Q ss_conf             9778999975254885799789951757899999977631210017998348720478872167654--30001416764
Q gi|254780247|r    1 MSCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDLKYHNG--ASVIRKIDCVS   78 (129)
Q Consensus         1 mD~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~Lky~~~--~~vi~~i~~iS   78 (129)
T Consensus         3 ~D~iaD~ltrIrNA~~a~~~~V~ip~SKl~~~Il~iL~~eGyI~~~~~~~~~~~~-~i~V~LkY~~~~~~pvI~~i~riS   81 (132)
T CHL00042          3 NDTIADMLTSIRNANMVKKGTVRIPSTNITENIVKILLREGFIENVRKHRENNKY-FLVLTLKYRGNKKKPYITILKRIS   81 (132)
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEEEECCCCC-EEEEEEECCCCCCCEEECEEEEEC
T ss_conf             8719999999871876599889973618999999999977904127997058861-799999744798874312047971


Q ss_pred             CCCCCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEEC
Q ss_conf             612120328111711104971899818866003799996499958999989
Q gi|254780247|r   79 KPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSVF  129 (129)
Q Consensus        79 kP~~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v~  129 (129)
T Consensus        82 kPg~RvY~~~~~lp~~~~g~G~~IlSTskGimt~~eA~~~~vGGellc~V~  132 (132)
T CHL00042         82 KPGLRIYSNYKRIPRILGGMGIVILSTSRGIMTDREARLKGIGGEILCYIW  132 (132)
T ss_pred             CCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEEEEC
T ss_conf             688401767415534129973999968975537699997499848999989