HHsearch alignment for GI: 254780247 and conserved domain: PRK00136
>PRK00136 rpsH 30S ribosomal protein S8; Validated.
Probab=100.00 E-value=0 Score=304.14 Aligned_cols=128 Identities=49% Similarity=0.795 Sum_probs=122.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCC-CCCCEECCCEEEEC
Q ss_conf 97789999752548857997899517578999999776312100179983487204788721676-54300014167646
Q gi|254780247|r 1 MSCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDLKYH-NGASVIRKIDCVSK 79 (129)
Q Consensus 1 mD~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~Lky~-~~~~vi~~i~~iSk 79 (129)
T Consensus 3 ~D~iaD~lt~IrNA~~a~k~~V~vp~Skl~~~il~iL~~eGyI~~~~~~~~~~~-~~i~V~LkY~~~~~p~I~~i~riSk 81 (131)
T PRK00136 3 TDPIADMLTRIRNAQMAKHETVSVPSSKLKVAIAEILKEEGYIKDYEVEEDGVK-KELEVELKYGENGEPVIEGIKRVSK 81 (131)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEEECCCCE-EEEEEEEECCCCCCCCEEEEEEECC
T ss_conf 756999999888798769988997461899999999997892423799817985-9999999615589840411089607
Q ss_pred CCCCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEEC
Q ss_conf 12120328111711104971899818866003799996499958999989
Q gi|254780247|r 80 PGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSVF 129 (129)
Q Consensus 80 P~~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v~ 129 (129)
T Consensus 82 Pg~RvY~~~~~l~~~~~g~G~~IlSTskGimt~~eA~~~~iGGellc~V~ 131 (131)
T PRK00136 82 PGLRVYKKKDELPKVLNGLGIAIVSTSKGVMTDREARKAGVGGEVLCYVW 131 (131)
T ss_pred CCCEEECCCCCCCCEECCCEEEEEECCCCCEEHHHHHHCCCCCEEEEEEC
T ss_conf 88547856100650518945999987996120799997399978999989