HHsearch alignment for GI: 254780247 and conserved domain: PRK04034
>PRK04034 rps8p 30S ribosomal protein S8P; Reviewed.
Probab=100.00 E-value=2.4e-41 Score=252.98 Aligned_cols=125 Identities=38% Similarity=0.510 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEE-ECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCC-CCCCCEECCCEEEE
Q ss_conf 977899997525488579978995-1757899999977631210017998348720478872167-65430001416764
Q gi|254780247|r 1 MSCLGDMLTRIRNANLRYKPSVVI-PFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDLKY-HNGASVIRKIDCVS 78 (129)
Q Consensus 1 mD~iad~lt~IrNA~~~~k~~v~i-p~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~Lky-~~~~~vi~~i~~iS 78 (129)
T Consensus 4 ~DpIaDmLtrIRNA~~~~k~~v~~~P~Skl~~~il~iL~~EGyI~~~~~~~~~~~~~-~~v~l~~~~n~~~~ik~r~~~~ 82 (130)
T PRK04034 4 LDPLANALSTIKNAERVGKKEVIIKPASKLIGNVLRVMQDEGYIGEFEYIDDGRGGK-FKVELLGRINKCGAIKPRFPVK 82 (130)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCE-EEEEEECCCCCCCCCCCCEECC
T ss_conf 377999999877098768975999767288999999998759551499986377874-8999822336678644735478
Q ss_pred CCCCCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEEC
Q ss_conf 612120328111711104971899818866003799996499958999989
Q gi|254780247|r 79 KPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSVF 129 (129)
Q Consensus 79 kP~~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v~ 129 (129)
T Consensus 83 ~~~~~~~---~~~~lp~~glGi~IlSTSkGvmtd~eAr~~~vGGEilc~V~ 130 (130)
T PRK04034 83 YDEFEKW---EKRYLPAKNFGILIVSTSKGVMSHYEAREKGIGGVLLAYVY 130 (130)
T ss_pred CCCCCCH---HCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEC
T ss_conf 8776421---01445567860899977975447699998299966999989