HHsearch alignment of GI: 254780247 and MMDB domain: 1sei_A_1-68

>1sei_A (A:1-68) Ribosomal protein S8; prokaryotic, rRNA-binding; 1.90A {Geobacillus stearothermophilus}
Probab=99.82  E-value=4.6e-20  Score=132.99  Aligned_cols=66  Identities=35%  Similarity=0.564  Sum_probs=61.9

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             9778999975254885799789951757899999977631210017998348720478872167654
Q gi|254780247|r    1 MSCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDLKYHNG   67 (129)
Q Consensus         1 mD~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~Lky~~~   67 (129)
                      ||||||+||+||||+++++.+|.+|+|+++.++|+||++||||++|++.++++.+ .+.|.|||..+
T Consensus         3 ~D~iaD~ltrIrNA~~~~~~~V~ip~Sk~~~~il~IL~~eGyI~~~~~~~~~~~~-~~~V~LKy~~N   68 (68)
T 1sei_A            3 TDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIEDNKQG-ILRIFLKYGPN   68 (68)
T ss_dssp             SHHHHHHHHHHHHHHHTTCSEEEEECCHHHHHHHHHHHHTTSEEEEEEEESSSCE-EEEEEECBSSS
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCC-EEEEEECCCCC
T ss_conf             6349999998787987699889961758999999999871832014786046775-59999114577