HHsearch results for GI: 254780247 and protein with PDBid: 2vqe_H
>2vqe_H 30S ribosomal protein S8, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.140.1.1 PDB: 1eg0_E* 1fka_H 1gix_K* 1hnw_H* 1hnx_H* 1hnz_H* 1hr0_H 1ibk_H* 1ibl_H* 1ibm_H 1j5e_H 1jgo_K* 1jgp_K* 1jgq_K* 1ml5_K* 1n32_H* 1n33_H* 1n34_H 1n36_H 1pns_H ...
Probab=100.00 E-value=0 Score=280.89 Aligned_cols=128 Identities=44% Similarity=0.702 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEE--------CCCCCCCCEEC
Q ss_conf 9778999975254885799789951757899999977631210017998348720478872--------16765430001
Q gi|254780247|r 1 MSCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVD--------LKYHNGASVIR 72 (129)
Q Consensus 1 mD~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~--------Lky~~~~~vi~ 72 (129)
.|||||||++|+||+++++.+|.+|+||+++++|++|++||||++|++.+++.... +.+. ++|.++.|+|+
T Consensus 3 ~D~iaD~l~~I~Na~~a~k~~v~ip~Skl~~~il~iL~~eGyI~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vI~ 81 (138)
T 2vqe_H 3 TDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPY-LRVYLKYGPRRQGPDPRPEQVIH 81 (138)
T ss_dssp SCHHHHHHHHHHHHHHTTCSCCCCBCCHHHHHHHHHHHHTTSSSEEEEEEETTEEE-EEEECCBCCCCSSSCCCCCBSCS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCCCCE-EEEEEECHHCCCCCCCCCCCCEE
T ss_conf 66699999987739876998799626089999999999879866642441578735-78876100002356778873210
Q ss_pred CCEEEECCCCCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEEC
Q ss_conf 416764612120328111711104971899818866003799996499958999989
Q gi|254780247|r 73 KIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSVF 129 (129)
Q Consensus 73 ~i~~iSkP~~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v~ 129 (129)
.++++|+|++|+|.+++++|++.+|+|++|+|||+|||||+||+++++|||+|||||
T Consensus 82 ~i~~iSkp~~r~y~~~~~l~~~~~g~G~~IlSTskGimt~~eA~~~~iGGe~l~~V~ 138 (138)
T 2vqe_H 82 HIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW 138 (138)
T ss_dssp CEEECSBTTBCCEECGGGCCCGGGGTSEEEEEETTEEEEHHHHHHTTCCEEEEEEEC
T ss_pred EEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEC
T ss_conf 036860432101047867655318855899987977311899998299977999989