HHSEARCH alignment of GI: 254780247 and SCOP domain: d1an7a_

Alignment
>d1an7a_ d.140.1.1 (A:) Ribosomal protein S8 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=281.14  Aligned_cols=128  Identities=45%  Similarity=0.724  Sum_probs=118.7

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEEC--------CCCCCCCEEC
Q ss_conf             97789999752548857997899517578999999776312100179983487204788721--------6765430001
Q gi|254780247|r    1 MSCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDL--------KYHNGASVIR   72 (129)
Q Consensus         1 mD~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~L--------ky~~~~~vi~   72 (129)
                      -|||||||++|+||++++|.+|.+|+||+++++|++|++||||++|++.+++.... +.+.+        +|.++.|+|+
T Consensus         1 tD~iaD~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~   79 (136)
T d1an7a_           1 TDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPY-LRVYLKYGPRRQGPDPRPEQVIH   79 (136)
T ss_dssp             CCHHHHHHHHHHHHHTTTCSEEEEECCHHHHHHHHHHHHTTSEEEEEEEEETTEEE-EEEEECEEEECSSSCCSEEESCC
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCE-EEEEEEHHHHCCCCCCCCCCCCC
T ss_conf             97289999987749876998799616678999999999779334147713677630-46643012110367778873211


Q ss_pred             CCEEEECCCCCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEEC
Q ss_conf             416764612120328111711104971899818866003799996499958999989
Q gi|254780247|r   73 KIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSVF  129 (129)
Q Consensus        73 ~i~~iSkP~~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v~  129 (129)
                      .++++|+||+|+|.++++||++.+|+|++|+|||+|||||+||+++++|||+|||||
T Consensus        80 ~i~~vSkP~~Rvy~~~~~l~~~~~g~G~~IlSTskGimt~~eA~~~~iGGe~L~~v~  136 (136)
T d1an7a_          80 HIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW  136 (136)
T ss_dssp             CEEECSBTTBCCEECGGGCCCGGGGTSEEEEEETTEEEEHHHHHHHTCCEEEEEEEC
T ss_pred             EEEEECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCEEEHHHHHHCCCCCEEEEEEC
T ss_conf             258953688533057001001249748999958987245999998099977999989


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S8
superfamily: Ribosomal protein S8
family: Ribosomal protein S8
domain: Ribosomal protein S8
species: Thermus thermophilus [TaxId: 274]