HHSEARCH alignment of GI: 254780247 and SCOP domain: d2gy9h1

Alignment
>d2gy9h1 d.140.1.1 (H:3-128) Ribosomal protein S8 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=286.45  Aligned_cols=125  Identities=42%  Similarity=0.741  Sum_probs=121.0

Q ss_pred             CHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCCCCEECCCEEEECCC
Q ss_conf             77899997525488579978995175789999997763121001799834872047887216765430001416764612
Q gi|254780247|r    2 SCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVDLKYHNGASVIRKIDCVSKPG   81 (129)
Q Consensus         2 D~iad~lt~IrNA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~~~~~~~~~~~~~i~v~Lky~~~~~vi~~i~~iSkP~   81 (129)
                      |||||||++||||+++++.+|.+|+||+++++|++|++||||++|+..++++.  .++|.|+|.+++|+|+++++||+||
T Consensus         2 D~iaD~l~~I~NA~~~~k~~v~ip~Skl~~~il~iL~~eGyI~~f~~~~~~k~--~i~i~Lky~~~k~vI~~~~~vSkp~   79 (126)
T d2gy9h1           2 DPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKP--ELELTLKYFQGKAVVESIQRVSRPG   79 (126)
T ss_dssp             CHHHHHHHHHHHHHHTTCSEECCBCCHHHHHHHHHHHHHTSEEEEEEECSSSC--EEEEEECCCSSSCSCSCCEECSCSS
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEECCCCC--EEEEEEECCCCCEEEECCEEEECCC
T ss_conf             81899999867488769988996074899999999976482345378238872--5999985058977772535860589


Q ss_pred             CCEECCHHHCCCHHCCCCEEEEECCCCEECHHHHHHCCCCCEEEEEE
Q ss_conf             12032811171110497189981886600379999649995899998
Q gi|254780247|r   82 RRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVGGEVLCSV  128 (129)
Q Consensus        82 ~r~y~~~~~l~~~~~g~G~~IiSTskGimt~~eA~~~~iGGeil~~v  128 (129)
                      +|+|.++++||++++|+|++|+|||+|||||+||+++++|||+||||
T Consensus        80 ~r~y~~~~~l~~~~~g~G~~IlSTskGimt~~eA~~~~vGGelL~~V  126 (126)
T d2gy9h1          80 LRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYV  126 (126)
T ss_dssp             SCCBCCTTTCCCGGGGTSCEEEEETTEEEEHHHHHHHTCCCEEEEEC
T ss_pred             CCCCCCHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHCCCCEEEEEC
T ss_conf             55325633401014864699961897557799999839995899979


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S8
superfamily: Ribosomal protein S8
family: Ribosomal protein S8
domain: Ribosomal protein S8
species: Escherichia coli [TaxId: 562]