PSIBLAST alignment of GI: 254780247 and protein with PDB id: 1i6u

>gi|15825871|pdb|1I6U|A Chain A, Rna-Protein Interactions: The Crystal Structure Of Ribosomal Protein S8RRNA COMPLEX FROM METHANOCOCCUS Jannaschii Length = 130
>gi|15825872|pdb|1I6U|B Chain B, Rna-Protein Interactions: The Crystal Structure Of Ribosomal Protein S8RRNA COMPLEX FROM METHANOCOCCUS Jannaschii Length = 130

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 1   MSCLGDMLTRIRNANLRYKPSVVI-PFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLK 59
           M  L + L  I N     K  V I P S+L  RVL V +  GYIGE+  I+ G+  I   
Sbjct: 4   MDPLANALNHISNCERVGKKVVYIKPASKLIGRVLKVXQDNGYIGEFEFIEDGRAGIFKV 63

Query: 60  VDLKYHNGASVIRKIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECK 119
             +   N    I+    V K G   Y  F+         GI+IV+T++GV +  +A++  
Sbjct: 64  ELIGKINKCGAIKPRFPVKKFG---YEKFEKRYLPARDFGILIVSTTQGVXSHEEAKKRG 120

Query: 120 VGGEVLCSVF 129
           +GG +L  V+
Sbjct: 121 LGGRLLAYVY 130