PSIBLAST alignment of GI: 254780247 and protein with PDB id: 1vs5
gi|116666555|pdb|1VS5|H Chain H, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 130
>gi|116666607|pdb|1VS7|H Chain H, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 130
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Query: 2 SCLGDMLTRIRNANLRYKPSVVIPFSRLHARVLDVLKTEGYIGEYCEIDAGKGRIQLKVD 61
+ DMLTRIRN K +V +P S+L + +VLK EG+I ++ G + +L++
Sbjct: 5 DPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKV--EGDTKPELELT 62
Query: 62 LKYHNGASVIRKIDCVSKPGRRLYSSFKDIPQVCNGLGIMIVTTSKGVMAGHQARECKVG 121
LKY G +V+ I VS+PG R+Y ++P+V GLGI +V+TSKGVM AR+ +G
Sbjct: 63 LKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLG 122
Query: 122 GEVLCSV 128
GE++C V
Sbjct: 123 GEIICYV 129