HHsearch results for GI: 254780248 and protein with PDBid: 2zkq_n

>2zkq_n 40S ribosomal protein S29E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_N

Probab=91.81  E-value=0.036  Score=32.73  Aligned_cols=30  Identities=17%  Similarity=0.495  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCCHHHHHHC--HHHHHHHHHHHC
Q ss_conf             022143566411440425--629999999965
Q gi|254780248|r   61 RNRCEISGRSRGVYRDFR--LSRLALRELGGV   90 (101)
Q Consensus        61 ~NRC~~TGR~Rgv~r~f~--lSRi~fRela~~   90 (101)
                      -+.|.++|+..|++++||  |||-+|||.|..
T Consensus        18 sr~Cr~Cg~~~glIrKYgL~~CRqCFre~A~d   49 (56)
T 2zkq_n           18 SRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKD   49 (56)
T ss_dssp             CCCCSSSCCSTTCCTTTCCCSCHHHHHHTTTT
T ss_pred             CCEEEECCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             76236779974311001732288899988785