HHsearch alignment for GI: 254780249 and conserved domain: CHL00078

Probab=100.00  E-value=0  Score=493.59  Aligned_cols=178  Identities=53%  Similarity=0.969  Sum_probs=176.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
Q ss_conf             11899999999999999826998222860449999745787565378999999987765389613541237642111558
Q gi|254780249|r    8 PRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIAGFKLRT   87 (185)
Q Consensus         8 pRLk~~Y~~~i~~dL~~k~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~~fkiRk   87 (185)
T Consensus         2 ~rLk~~Y~~~i~~~L~~~~~y~N~~~vPkl~KIvln~gvg~a~~~~k~l~~~~~~L~~ITGQkp~~t~AKksia~FKlRk   81 (180)
T CHL00078          2 QRLKTLYLEKIVPKLIKEFGYKNIHQVPKLKKIVINRGLGEASQNAKILESSIKELSIITGQKPIITRAKKAIAGFKIRE   81 (180)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf             37789999999999999878998610572027999898864541737899999999998399847875124556535258


Q ss_pred             CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf             98628899960342899999999987677520468871101577731433011100687540146885543599980448
Q gi|254780249|r   88 GMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTTR  167 (185)
Q Consensus        88 G~piG~kvTLRg~~my~FL~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~Iti~Tta~  167 (185)
T Consensus        82 g~piG~kVTLRg~~My~FLdkLi~i~lPrirdFrGi~~~sfD~~GN~s~Gi~e~~iFPEI~~d~~~~~~G~~ItivTta~  161 (180)
T CHL00078         82 KMPVGVSVTLRGDKMYAFLDRLINLALPRIRDFQGISPKSFDGRGNYNLGLKEQLIFPEIDYDKIDQIRGMDISIVTTAK  161 (180)
T ss_pred             CCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf             97416799975799999999999985110002579984334799757546404215776044545787887589991779


Q ss_pred             CHHHHHHHHHHHCCCCCC
Q ss_conf             968999999980898689
Q gi|254780249|r  168 SDREAKYLLTLFGFPFPK  185 (185)
Q Consensus       168 ~~~ea~~Lls~~g~Pf~k  185 (185)
T Consensus       162 td~ea~~LL~~~g~PF~~  179 (180)
T CHL00078        162 TDEEGLALLKELGMPFKD  179 (180)
T ss_pred             CHHHHHHHHHHCCCCCCC
T ss_conf             989999999986998178