HHsearch results for GI: 254780249 and protein with PDBid: 3bbo_H
>3bbo_H Ribosomal protein L5; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=100.00 E-value=0 Score=465.35 Aligned_cols=184 Identities=50% Similarity=0.874 Sum_probs=181.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 98875611899999999999999826998222860449999745787565378999999987765389613541237642
Q gi|254780249|r 2 VDCKYEPRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIA 81 (185)
Q Consensus 2 ~~~~~~pRLk~~Y~~~i~~dL~~k~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~ 81 (185)
++..|++|||.||+++|+++|+++|+|+|+|++|+|+||+||+|+|+++.|++.++.+..+|+.||||+|+.++||+||+
T Consensus 11 ~~~~~m~rLk~~Y~~~v~~~L~~k~~y~Nim~vPkl~KIvvn~gvg~~~~d~k~l~~a~~~L~~ITGQkp~~tkakksia 90 (220)
T 3bbo_H 11 AEAETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELALITGQRPVKTKAKTSIA 90 (220)
T ss_dssp -------CHHHHHTTTHHHHHHHSSCCCCSSSSCCEEEEECCCCCCCSSCCHHHHHHHHHHHHHHTCSCCCCCBCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCCC
T ss_conf 66435378899999999999999858998731676669998678881110627899999999977379753145655530
Q ss_pred CCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEE
Q ss_conf 11155898628899960342899999999987677520468871101577731433011100687540146885543599
Q gi|254780249|r 82 GFKLRTGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDIS 161 (185)
Q Consensus 82 ~fkiRkG~piG~kvTLRg~~my~FL~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~It 161 (185)
+||+|+|+|+||+|||||++||+||+||+++||||+|||+|++.++||+.|||+||++|+++||||+||.|++++|||||
T Consensus 91 ~FklRkG~piG~kVTLRg~~my~FL~kLi~ivlPrirdf~Gi~~~sfd~~gN~sfGi~e~~~FPEi~~d~f~~i~G~nIt 170 (220)
T 3bbo_H 91 GFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVNPNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVC 170 (220)
T ss_dssp SSCCCTTCBCCCCCEECTHHHHHHHHHHHHSSTTTSSSCCCCCCSCCCSSSEEEEEECSCCCCSSCCTTSCSSCCCEEEE
T ss_pred CCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCEEE
T ss_conf 00124897347899877077999999999973400001456764345688850102203210888674334675785389
Q ss_pred EECCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 980448968999999980898689
Q gi|254780249|r 162 ICTTTRSDREAKYLLTLFGFPFPK 185 (185)
Q Consensus 162 i~Tta~~~~ea~~Lls~~g~Pf~k 185 (185)
|||||+|++||++|||+|||||+|
T Consensus 171 IvTtA~t~~ea~~LLs~~g~Pf~k 194 (220)
T 3bbo_H 171 ITTTAKTDKEAYKLLSLMGMPFRE 194 (220)
T ss_dssp EEESCSSGGGTHHHHHTTTCCC--
T ss_pred EEECCCCHHHHHHHHHHCCCCEEC
T ss_conf 995469979999999986998617