RPSBLAST alignment of GI: 254780249 and protein with PDBid: 1vq8

>1vq8_D 50S ribosomal protein L5P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.77.1.1 PDB: 1vq4_D* 1vq5_D* 1vq6_D* 1vq7_D* 1s72_D* 1vq9_D* 1vqk_D* 1vql_D* 1vqm_D* 1vqn_D* 1vqo_D* 1vqp_D* 1yhq_D* 1yi2_D* 1yij_D* 1yit_D* 1yj9_D* 1yjn_D* 1yjw_D* 2otj_D* ... Length = 177

 Score =  174 bits (442), Expect = 1e-44
 Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 11/165 (6%)

Query: 21  AMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSI 80
           +  +     + M+ P+IEKVVV+MG+G    D   AE     L  ITGQ PV T+A+R++
Sbjct: 3   SESESGGDFHEMREPRIEKVVVHMGIGHGGRDLANAED---ILGEITGQMPVRTKAKRTV 59

Query: 81  AGFKLRTGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIRE 140
             F +R G PIG KVTLR     +FL   + +            +  FD +GNFSFG+ E
Sbjct: 60  GEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAEL--------ATSQFDDTGNFSFGVEE 111

Query: 141 HIVFPEINYDKVDCVLGMDISICTTTRSDREAKYLLTLFGFPFPK 185
           H  FP   YD    + G+D+++       R AK        P   
Sbjct: 112 HTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKH 156