RPSBLAST alignment of GI: 254780249 and protein with PDBid: 2noq
>2noq_H 60S ribosomal protein L11-B; IRES RNA, ribosome, translation, internal initiation; 7.30A {Saccharomyces cerevisiae} PDB: 1s1i_J 2zkr_d Length = 165
Score = 161 bits (410), Expect = 6e-41
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 30 NVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIAGFKLRTGM 89
N M+ KIEK+V+N+ VGE + A+ L ++GQ PV ++AR ++ F +R
Sbjct: 1 NPMRDLKIEKLVLNISVGE---SGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 57
Query: 90 PIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINY 149
I VT+RG + L+R + + ++RD + F +GNF FGI EHI I Y
Sbjct: 58 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRN------FSATGNFGFGIDEHI-DLGIKY 110
Query: 150 DKVDCVLGMDISICTTTRSDREAK 173
D + GMD + R +
Sbjct: 111 DPSIGIFGMDFYVVMNRPGARVTR 134