HHsearch alignment for GI: 254780250 and conserved domain: CHL00141

Probab=100.00  E-value=1.2e-33  Score=203.02  Aligned_cols=79  Identities=37%  Similarity=0.606  Sum_probs=74.9

Q ss_pred             CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCC-CCCCEEEEEEECCCHHHEEEECC-CCCEEE
Q ss_conf             7226586999984378886469999974699899906059743205777-65651799970468665788978-996228
Q gi|254780250|r    2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP-NKEAGIISKEASIHLSNLSLIDK-DGKQVR   79 (102)
Q Consensus         2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~-~~~gGii~~E~pIh~SNV~lvd~-~~k~tr   79 (102)
T Consensus        10 ~kIkkGD~V~VisGkdKGk~G~Vl~v~~~~~~viVeGvN~~kKH~Kp~~~~~~GgIi~~EaPIhiSNV~l~dp~~~k~tR   89 (90)
T CHL00141         10 MHVKKGDTVQVISGKDKGKIGEVLKIIRKSNKVIVKGINIKTKHIKPQKEGEVGEIKQFEAPIHSSNVMLYNEENNIASR   89 (90)
T ss_pred             EEEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCC
T ss_conf             06708999999166789973579999867999999795888871589889998889898738322348888787797478


Q ss_pred             E
Q ss_conf             8
Q gi|254780250|r   80 V   80 (102)
Q Consensus        80 v   80 (102)
T Consensus        90 ~   90 (90)
T CHL00141         90 S   90 (90)
T ss_pred             C
T ss_conf             9