HHsearch alignment for GI: 254780250 and conserved domain: PRK05609

>PRK05609 nusG transcription antitermination protein NusG; Validated.
Probab=96.38  E-value=0.007  Score=35.96  Aligned_cols=35  Identities=23%  Similarity=0.168  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             22658699998437888646999997469989990
Q gi|254780250|r    3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ   37 (102)
Q Consensus         3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe   37 (102)
T Consensus       128 ~~~~Gd~V~I~~GPf~g~~g~v~~~d~~k~Rv~V~  162 (183)
T PRK05609        128 DFEVGEVVRVTDGPFADFNGTVEEVDYEKSKLKVL  162 (183)
T ss_pred             CCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
T ss_conf             32279899993678999689999983878999999