HHsearch alignment for GI: 254780250 and conserved domain: pfam00467

>pfam00467 KOW KOW motif. This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and NusG.

Probab=97.43  E-value=0.00013  Score=45.37  Aligned_cols=32  Identities=41%  Similarity=0.574  Sum_probs=29.9

Q ss_pred             CCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             58699998437888646999997469989990
Q gi|254780250|r    6 TGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ   37 (102)
Q Consensus         6 kGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe   37 (102)
T Consensus         1 ~G~~V~V~~G~~~G~~g~I~~i~~~~~~v~v~   32 (32)
T pfam00467         1 KGDVVRVISGPFKGKKGKVVEVDDSKARVHVE   32 (32)
T ss_pred             CCCEEEEECCCCCCCCCCEEEECCCCEEEECC
T ss_conf             98789993467568755489960752068509