HHsearch alignment of GI: 254780250 and MMDB domain: 1vq8_T_20-120
>1vq8_T (T:20-120) 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=99.92 E-value=2.9e-26 Score=162.66 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=70.7
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECC-CCCEEEE
Q ss_conf 722658699998437888646999997469989990605974320577765651799970468665788978-9962288
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDK-DGKQVRV 80 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~-~~k~trv 80 (102)
++|++||+|+||+|+|||++|+|++|++++++|+|||+|+.++|.+ ++|+|||+|||||+|| +++|+|+
T Consensus 22 ~~I~~GD~V~Vi~G~dkGk~GkV~~V~~~~~~V~Vegin~~k~~~k----------~~e~pIh~SnV~lv~~~~~~~~Rv 91 (101)
T 1vq8_T 22 VRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE----------EVPRPLDTSNVRVTDLDLEDEKRE 91 (101)
T ss_dssp EECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECSSSC----------EEECCBCGGGEEEEECCCCCHHHH
T ss_pred CCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEECCEEEEECCCC----------EEECCCCHHHEEEEECCCCCCHHH
T ss_conf 4031699999915478997513999987789999966189954798----------251544648979983767971253
Q ss_pred EEEEEC
Q ss_conf 999999
Q gi|254780250|r 81 GFSFVD 86 (102)
Q Consensus 81 ~~~~~d 86 (102)
+|.+.+
T Consensus 92 ~~~~~~ 97 (101)
T 1vq8_T 92 ARLESE 97 (101)
T ss_dssp HHHHCS
T ss_pred HHHHCC
T ss_conf 333233