HHsearch alignment of GI: 254780250 and MMDB domain: 1vq8_T_20-120

>1vq8_T (T:20-120) 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=99.92  E-value=2.9e-26  Score=162.66  Aligned_cols=75  Identities=23%  Similarity=0.267  Sum_probs=70.7

Q ss_pred             CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECC-CCCEEEE
Q ss_conf             722658699998437888646999997469989990605974320577765651799970468665788978-9962288
Q gi|254780250|r    2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDK-DGKQVRV   80 (102)
Q Consensus         2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~-~~k~trv   80 (102)
                      ++|++||+|+||+|+|||++|+|++|++++++|+|||+|+.++|.+          ++|+|||+|||||+|| +++|+|+
T Consensus        22 ~~I~~GD~V~Vi~G~dkGk~GkV~~V~~~~~~V~Vegin~~k~~~k----------~~e~pIh~SnV~lv~~~~~~~~Rv   91 (101)
T 1vq8_T           22 VRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE----------EVPRPLDTSNVRVTDLDLEDEKRE   91 (101)
T ss_dssp             EECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECSSSC----------EEECCBCGGGEEEEECCCCCHHHH
T ss_pred             CCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEECCEEEEECCCC----------EEECCCCHHHEEEEECCCCCCHHH
T ss_conf             4031699999915478997513999987789999966189954798----------251544648979983767971253


Q ss_pred             EEEEEC
Q ss_conf             999999
Q gi|254780250|r   81 GFSFVD   86 (102)
Q Consensus        81 ~~~~~d   86 (102)
                      +|.+.+
T Consensus        92 ~~~~~~   97 (101)
T 1vq8_T           92 ARLESE   97 (101)
T ss_dssp             HHHHCS
T ss_pred             HHHHCC
T ss_conf             333233