HHSEARCH alignment of GI: 254780250 and SCOP domain: d1nz9a_

Alignment

Probab=96.70  E-value=0.001  Score=38.01  Aligned_cols=34  Identities=29%  Similarity=0.418  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             2658699998437888646999997469989990
Q gi|254780250|r    4 IRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ   37 (102)
Q Consensus         4 ikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe   37 (102)
                      ++.||.|.|++|...|-.|+|.++++.+.++.|.
T Consensus         5 F~~Gd~V~I~~GpF~g~~g~V~~i~~~k~rv~V~   38 (58)
T d1nz9a_           5 FREGDQVRVVSGPFADFTGTVTEINPERGKVKVM   38 (58)
T ss_dssp             CCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEE
T ss_pred             CCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
T ss_conf             0699999990058999889999992889999999

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: N-utilization substance G protein NusG, C-terminal domain
domain: N-utilization substance G protein NusG, C-terminal domain
species: Thermus thermophilus [TaxId: 274]