HHSEARCH alignment of GI: 254780250 and SCOP domain: d1vqot1

Alignment

Probab=99.89  E-value=2.9e-24  Score=149.61  Aligned_cols=71  Identities=25%  Similarity=0.343  Sum_probs=65.5

Q ss_pred             CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECCC-CCEEEE
Q ss_conf             7226586999984378886469999974699899906059743205777656517999704686657889789-962288
Q gi|254780250|r    2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDKD-GKQVRV   80 (102)
Q Consensus         2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~~-~k~trv   80 (102)
                      |+|++||+|+||+|+|||++|+|++|++++++|+|||+|+.++|.+          +.|+|||+|||||+||. ++++|+
T Consensus        40 ~~IkkGD~V~Vi~Gk~KGk~GkV~~V~~k~~~V~Vegin~~k~~~k----------~~~~pIh~SNv~i~~~~~~~~~R~  109 (119)
T d1vqot1          40 VRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE----------EVPRPLDTSNVRVTDLDLEDEKRE  109 (119)
T ss_dssp             EECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECTTSC----------EEECCBCGGGEEEEECCCCSHHHH
T ss_pred             CCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCEEEECCCC----------EEECCCCHHHEEEEECCCCCCHHH
T ss_conf             5142799999925478998514999987799999969189962786----------061457538979984767960464


Q ss_pred             EE
Q ss_conf             99
Q gi|254780250|r   81 GF   82 (102)
Q Consensus        81 ~~   82 (102)
                      ++
T Consensus       110 ~~  111 (119)
T d1vqot1         110 AR  111 (119)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             44

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: Ribosomal proteins L24p and L21e
domain: Ribosomal proteins L24 (L24p)
species: Archaeon Haloarcula marismortui [TaxId: 2238]