HHSEARCH alignment of GI: 254780250 and SCOP domain: d2do3a1

Alignment

Probab=96.06  E-value=0.0032  Score=35.36  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=25.8

Q ss_pred             CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEE
Q ss_conf             226586999984378886469999974699899
Q gi|254780250|r    3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAF   35 (102)
Q Consensus         3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~Vi   35 (102)
                      .++.||-|.||+|++.|.+|.|+++.  .+.|+
T Consensus        10 ~F~~GDhVkVi~G~~~g~tGlVV~v~--~~~v~   40 (62)
T d2do3a1          10 YFKMGDHVKVIAGRFEGDTGLIVRVE--ENFVI   40 (62)
T ss_dssp             SCCTTCEEEESSSTTTTCEEEEEEEC--SSCEE
T ss_pred             CCCCCCEEEEECCEECCCCEEEEEEE--CCEEE
T ss_conf             15799858991647869628999994--99999

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: SPT5 KOW domain-like
domain: Transcription elongation factor SPT5
species: Human (Homo sapiens) [TaxId: 9606]