PSIBLAST alignment of GI: 254780250 and protein with PDB id: 2j01
gi|116668256|pdb|2J01|Y Chain Y, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. Length = 110
>gi|116668317|pdb|2J03|Y Chain Y, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. Length = 110
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP-NKEAGIISKE 60
++ GD VLV +GK KG+ G+V V+ K V+GVNIVK+ R +P + G I KE
Sbjct: 5 MHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKE 64
Query: 61 ASIHLSNLSLIDK-DGKQVRVGFSF-VDGKKIRIAKRSGEPID 101
A +H S + I GK RV F +GKKIR+ + G +D
Sbjct: 65 APLHASKVRPICPACGKPTRVRKKFLENGKKIRVCAKCGGALD 107