RPSBLAST alignment of GI: 254780250 and protein with PDBid: 2j01
>2j01_Y 50S ribosomal protein L24; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.34.5.1 PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 3d5b_Y 3d5d_Y 3f1f_Y 3f1h_Y ... Length = 110
Score = 97.5 bits (243), Expect = 6e-22
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPN-KEAGIISKEA 61
++ GD VLV +GK KG+ G+V V+ K V+GVNIVK+ R +P + G I KEA
Sbjct: 6 HVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKEA 65
Query: 62 SIHLSNLSLID-KDGKQVRVGFSFV-DGKKIRIAKRSGEPID 101
+H S + I GK RV F+ +GKKIR+ + G +D
Sbjct: 66 PLHASKVRPICPACGKPTRVRKKFLENGKKIRVCAKCGGALD 107