HHsearch alignment for GI: 254780251 and conserved domain: CHL00057

Probab=100.00  E-value=0  Score=329.90  Aligned_cols=122  Identities=49%  Similarity=0.801  Sum_probs=120.7

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf             96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD   80 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~   80 (122)
T Consensus         1 MIq~~T~l~V~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~~~~~vkkg~v~~AvIVrtkk~~~R~dG~~i~F~   80 (122)
T CHL00057          1 MIQPQTYLNVADNSGARKLMCIRILGASNRRYAHIGDVIVAVIKEAVPNMPLKKSEVVRAVIVRTCKELKRDNGMIIRFD   80 (122)
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCEEEEEEEEECCCEECCCCCEEEEC
T ss_conf             96546689997789984899999858888622100669999998527787410242889999985340385899898817


Q ss_pred             CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             805999989997602266331006664179808875243129
Q gi|254780251|r   81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
T Consensus        81 ~Na~VLi~~~~~p~GTrI~Gpv~~Elr~k~~~Ki~sla~~vi  122 (122)
T CHL00057         81 DNAAVIIDQEGNPKGTRVFGPIARELRELNFTKIVSLAPEVL  122 (122)
T ss_pred             CCEEEEECCCCCEEEEEEECCCHHHHHHCCCCEEEECCCCCC
T ss_conf             837999989999825478353259987658820013440009