HHsearch alignment for GI: 254780251 and conserved domain: COG0093
>COG0093 RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=332.99 Aligned_cols=122 Identities=57% Similarity=0.910 Sum_probs=120.6
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf 96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD 80 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~ 80 (122)
T Consensus 1 miq~~t~l~vADNSGAk~v~~I~V~gg~~r~~A~vGD~ivvsVKka~P~~~vKkg~V~~AViVRtkk~~rR~DGs~i~Fd 80 (122)
T COG0093 1 MIQVQTRLNVADNSGAKEVMCIKVLGGSRRRYAGVGDIIVVSVKKAIPRGMVKKGDVVKAVVVRTKKEVRRPDGSYIKFD 80 (122)
T ss_pred CCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCEEEEEEEEECCCEECCCCCEEEEC
T ss_conf 96633589872189974899999934665200477989999995146765400265689999984785086998889867
Q ss_pred CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf 805999989997602266331006664179808875243129
Q gi|254780251|r 81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV 122 (122)
Q Consensus 81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi 122 (122)
T Consensus 81 dNA~Viin~~g~PrGtrI~GPVaRElr~~~~~kI~SlA~eVv 122 (122)
T COG0093 81 DNAAVIINPDGEPRGTRIFGPVARELRERGFMKIASLAPEVV 122 (122)
T ss_pred CCEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEECCEECC
T ss_conf 855999899998553358564238787557843343340419