HHsearch alignment for GI: 254780251 and conserved domain: COG0093

>COG0093 RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=332.99  Aligned_cols=122  Identities=57%  Similarity=0.910  Sum_probs=120.6

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf             96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD   80 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~   80 (122)
T Consensus         1 miq~~t~l~vADNSGAk~v~~I~V~gg~~r~~A~vGD~ivvsVKka~P~~~vKkg~V~~AViVRtkk~~rR~DGs~i~Fd   80 (122)
T COG0093           1 MIQVQTRLNVADNSGAKEVMCIKVLGGSRRRYAGVGDIIVVSVKKAIPRGMVKKGDVVKAVVVRTKKEVRRPDGSYIKFD   80 (122)
T ss_pred             CCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCEEEEEEEEECCCEECCCCCEEEEC
T ss_conf             96633589872189974899999934665200477989999995146765400265689999984785086998889867


Q ss_pred             CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             805999989997602266331006664179808875243129
Q gi|254780251|r   81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
T Consensus        81 dNA~Viin~~g~PrGtrI~GPVaRElr~~~~~kI~SlA~eVv  122 (122)
T COG0093          81 DNAAVIINPDGEPRGTRIFGPVARELRERGFMKIASLAPEVV  122 (122)
T ss_pred             CCEEEEECCCCCCCCCEEECCHHHHHHHCCCCEEEECCEECC
T ss_conf             855999899998553358564238787557843343340419