HHsearch alignment of GI: 254780251 and MMDB domain: 2j01_O_1-99

>2j01_O (O:1-99) 50S ribosomal protein L14; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=100.00  E-value=4.5e-41  Score=257.63  Aligned_cols=99  Identities=54%  Similarity=0.845  Sum_probs=98.2

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf             96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD   80 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~   80 (122)
                      |||.+|+|+|+|||||++++||++|+++++++|++||+|++|||+++|++++|||++++|+|||||++++|.||++++||
T Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~iGD~I~vsVkk~~p~~~vkkg~v~~avIVrtkk~~~r~dG~~i~F~   80 (99)
T 2j01_O            1 MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEIKRPDGSAIRFD   80 (99)
T ss_dssp             CCCTTCEEEECSSSSCCEEEEEEECSSTTCCCCCTTCEEEEEEEECCTTCSSCSSCEEEEEEEECSSCEECTTSCEEECS
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCEECCCCCEEECC
T ss_conf             97667678882589864999999968888776644719999997136577214785423388860154396999999738


Q ss_pred             CEEEEEECCCCCEECCEEE
Q ss_conf             8059999899976022663
Q gi|254780251|r   81 KNAAVLIDNKKDLLASRVF   99 (122)
Q Consensus        81 ~Na~VLin~~~~p~GtRI~   99 (122)
                      |||+||+|++++|+|||||
T Consensus        81 ~Na~VLi~~~~~p~GTrIf   99 (99)
T 2j01_O           81 DNAAVIINNQLEPRGTRVF   99 (99)
T ss_dssp             SCEEEEECTTSCCSSSCCC
T ss_pred             CCEEEEECCCCCEEEEEEE
T ss_conf             9779999899999574696