HHsearch alignment of GI: 254780251 and MMDB domain: 2zkr_k_1-114

>2zkr_k (k:1-114) 60S ribosomal protein L23; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1i_R
Probab=100.00  E-value=3.9e-35  Score=223.28  Aligned_cols=92  Identities=30%  Similarity=0.501  Sum_probs=87.5

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCC----CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf             967786899996789429999997268876----4257388899999820578721477378999997113517689888
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKR----KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV   76 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~----~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~   76 (122)
                      |||.+|+|+|+|||||++++||++++++++    ++|.+||+|++|||++.|++   +||+++|||||||++++|+||++
T Consensus        19 mIq~~T~L~VaDNSGak~v~cI~v~~~~~~~~~~~~a~iGD~IvvsVKk~~p~~---kg~v~~AVIVrtkk~~rR~dG~~   95 (114)
T 2zkr_k           19 GLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPEL---RKKVHPAVVIRQRKSYRRKDGVF   95 (114)
T ss_dssp             CEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEECTTCEEEEEEEEECTTT---TTCEEEEEEEECSSCEECTTSCE
T ss_pred             ECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCC---CCCCEEEEEEEEEEEEECCCCCE
T ss_conf             434378999713877237999998676786434545635269999996057766---65636999999823588379958


Q ss_pred             EEECCEEEEEECCCCCEEC
Q ss_conf             8618805999989997602
Q gi|254780251|r   77 VRFDKNAAVLIDNKKDLLA   95 (122)
Q Consensus        77 i~F~~Na~VLin~~~~p~G   95 (122)
                      ++||||||||+|++++|+|
T Consensus        96 i~FddNavVLi~~~~~P~G  114 (114)
T 2zkr_k           96 LYFEDNAGVIVNNKGEMKG  114 (114)
T ss_dssp             ECCSSCEEEEBCTTSCBSS
T ss_pred             EECCCCEEEEECCCCCEEE
T ss_conf             9748965999989998714