HHsearch alignment of GI: 254780251 and MMDB domain: 2zkr_k_1-114
>2zkr_k (k:1-114) 60S ribosomal protein L23; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1i_R
Probab=100.00 E-value=3.9e-35 Score=223.28 Aligned_cols=92 Identities=30% Similarity=0.501 Sum_probs=87.5
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECCCCCC----CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf 967786899996789429999997268876----4257388899999820578721477378999997113517689888
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKR----KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV 76 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~----~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~ 76 (122)
|||.+|+|+|+|||||++++||++++++++ ++|.+||+|++|||++.|++ +||+++|||||||++++|+||++
T Consensus 19 mIq~~T~L~VaDNSGak~v~cI~v~~~~~~~~~~~~a~iGD~IvvsVKk~~p~~---kg~v~~AVIVrtkk~~rR~dG~~ 95 (114)
T 2zkr_k 19 GLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPEL---RKKVHPAVVIRQRKSYRRKDGVF 95 (114)
T ss_dssp CEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEECTTCEEEEEEEEECTTT---TTCEEEEEEEECSSCEECTTSCE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCC---CCCCEEEEEEEEEEEEECCCCCE
T ss_conf 434378999713877237999998676786434545635269999996057766---65636999999823588379958
Q ss_pred EEECCEEEEEECCCCCEEC
Q ss_conf 8618805999989997602
Q gi|254780251|r 77 VRFDKNAAVLIDNKKDLLA 95 (122)
Q Consensus 77 i~F~~Na~VLin~~~~p~G 95 (122)
++||||||||+|++++|+|
T Consensus 96 i~FddNavVLi~~~~~P~G 114 (114)
T 2zkr_k 96 LYFEDNAGVIVNNKGEMKG 114 (114)
T ss_dssp ECCSSCEEEEBCTTSCBSS
T ss_pred EECCCCEEEEECCCCCEEE
T ss_conf 9748965999989998714