HHsearch results for GI: 254780251 and protein with PDBid: 1vq8_K
>1vq8_K 50S ribosomal protein L14P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.39.1.1 PDB: 1vq4_K* 1vq5_K* 1vq6_K* 1vq7_K* 1s72_K* 1vq9_K* 1vqk_K* 1vql_K* 1vqm_K* 1vqn_K* 1vqo_K* 1vqp_K* 1yhq_K* 1yi2_K* 1yij_K* 1yit_K* 1yj9_K* 1yjn_K* 1yjw_K* 2otj_K* ...
Probab=100.00 E-value=0 Score=294.02 Aligned_cols=118 Identities=34% Similarity=0.519 Sum_probs=111.0
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECCCCCC----CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf 967786899996789429999997268876----4257388899999820578721477378999997113517689888
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKR----KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV 76 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~----~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~ 76 (122)
|||.+|+|+|+|||||++++||++++++.+ ++|.+||+|++|||++.|+ +||++++|+|||||++++|+||++
T Consensus 11 ~iq~~s~l~v~DNSGak~v~cI~V~~~~~~k~r~~~a~vGD~IvvsVk~~~p~---~k~~v~~AVIVrtkk~~~R~dG~~ 87 (132)
T 1vq8_K 11 GLEKGSLITCADNTGARELKVISVHGYSGTKNRLPKAGLGDKITVSVTKGTPE---MRRQVLEAVVVRQRKPIRRPDGTR 87 (132)
T ss_dssp CEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEECTTCEEEEEEEEECTT---TTTCEEEEEEEECSSCEECTTSCE
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCC---CCCCEEEEEEEEECCCEECCCCCE
T ss_conf 34516789984288875799999965667433366686162999999746765---467522577888746328499998
Q ss_pred EEECCEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf 8618805999989997602266331006664179808875243129
Q gi|254780251|r 77 VRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV 122 (122)
Q Consensus 77 i~F~~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi 122 (122)
++||||||||+|++++|+||||||||++|||++ |+||+|||++||
T Consensus 88 i~FddNa~VLi~~~~~p~GTrI~GpV~~Elr~k-~~ki~slA~~iv 132 (132)
T 1vq8_K 88 VKFEDNAAVIVDENEDPRGTELKGPIAREVAQR-FGSVASAATMIV 132 (132)
T ss_dssp EEESSCEEEEECTTSCBSSSCBCSEECHHHHHH-SHHHHTTCSEEC
T ss_pred EECCCCEEEEECCCCCEEEEEEECCHHHHHHHH-HHHHHHCCCCCC
T ss_conf 984897899998999982607816177999876-158885231109