HHSEARCH alignment of GI: 254780251 and SCOP domain: d2j01o1

Alignment
>d2j01o1 b.39.1.1 (O:1-122) Ribosomal protein L14 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=322.88  Aligned_cols=122  Identities=57%  Similarity=0.881  Sum_probs=120.6

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf             96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD   80 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~   80 (122)
                      |||.+|+|+|+|||||+.++||++|+++++++|++||+|++|||+++|+++++||++++|+|||||++++|.||++++||
T Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVkk~~~~~~vkkg~v~~AvIVrtkk~~~r~dG~~i~F~   80 (122)
T d2j01o1           1 MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEIKRPDGSAIRFD   80 (122)
T ss_dssp             CCCTTCEEEECSSSSCCEEEEEEECSSTTCCCCCTTCEEEEEEEECCTTCSSCSSCEEEEEEEECSSCEECTTSCEEECS
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEECCCCCEEECC
T ss_conf             97667678882589875999999958888766644729999995025577223574734067753063486999999828


Q ss_pred             CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             805999989997602266331006664179808875243129
Q gi|254780251|r   81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
                      ||||||+|++++|+||||+||+|+|||+++|+||+||||+||
T Consensus        81 ~Na~VLl~~~~~p~GTrI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
T d2j01o1          81 DNAAVIINNQLEPRGTRVFGPVARELREKGFMKIVSLAPEVL  122 (122)
T ss_dssp             SCEEEEECTTSCCSSSCCCSCCCTHHHHHCCHHHHHHCSCCC
T ss_pred             CCEEEEECCCCCEEEEEEECCCHHHHHHCCCCHHHCCCCCCC
T ss_conf             977999989999935379635239986468832203541009


SCOP domain information

class: All beta proteins
fold: Ribosomal protein L14
superfamily: Ribosomal protein L14
family: Ribosomal protein L14
domain: Ribosomal protein L14
species: Thermus thermophilus [TaxId: 274]