PSIBLAST alignment of GI: 254780251 and protein with PDB id: 1pnu
>gi|34811562|pdb|1PNU|I Chain I, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 132
>gi|34811615|pdb|1PNY|I Chain I, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 132
Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 61/132 (46%), Positives = 87/132 (65%), Gaps = 12/132 (9%)
Query: 2 IQMQTSLSISDNSGARLVKCIKVLGGS------------KRKCASIGDTVVVAVKEVIPR 49
I Q+ L ++DNSGAR + CI+VL ++ A +GD +V +VK+ PR
Sbjct: 1 IMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPR 60
Query: 50 SKVKKGSVQKAIIVRVSYGIRRSDGSVVRFDKNAAVLIDNKKDLLASRVFGPVPRELRIK 109
VK G V KA++VR S+ I+R+DGS +RFD+NAAV+I+N+ + +RVFGPV RELR +
Sbjct: 61 GAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDR 120
Query: 110 GHLKILSLAAEV 121
+KI+SLA EV
Sbjct: 121 RFMKIVSLAPEV 132