HHsearch alignment for GI: 254780252 and conserved domain: TIGR03630

>TIGR03630 arch_S17P archaeal ribosomal protein S17P. This model describes exclusively the archaeal ribosomal protein S17P. It excludes homologous ribosomal proteins S11 from eukaryotes and S17 from bacteria.
Probab=99.97  E-value=9.5e-31  Score=189.54  Aligned_cols=74  Identities=35%  Similarity=0.556  Sum_probs=71.3

Q ss_pred             CEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCEEEEECCC-CCCCCCCCEEEEEECCCCCCCEEEEEEEE
Q ss_conf             347999999608986199999718878641308735103898688-66040687899996377543203999976
Q gi|254780252|r    3 KRVLQGMVVSDKSEKTIIVLVERRFSHPRFQKTIRRSKRYAVHDE-NNKYKVGDFVSIEESAPISKKKSWLVIDS   76 (79)
Q Consensus         3 ~k~l~G~Vvs~km~KTv~V~v~r~~~~~ky~K~~~~~kk~~vHD~-~~~~~~GD~V~i~e~rPiSK~K~~~vve~   76 (79)
T Consensus        27 Gril~G~VvS~Km~KTvvV~ver~~~hpkY~k~~kr~kk~~aHd~~~~~~kvGD~V~I~E~RPlSKtK~~~Vvek  101 (102)
T TIGR03630        27 GQILEGVVVSDKMNKTVVVEREYLYYDRKYERYERRRSKIHAHNPPCIDVKEGDIVIIGETRPLSKTKSFVVLGK  101 (102)
T ss_pred             EEEEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEECCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEC
T ss_conf             789999999787996399999999872664607896320788897567789999999998003667457899871